Protein Alignment tai and Arntl

DIOPT Version :9

• Sequence 1: NP_001245949.1
• Gene: tai / 34242
• FlyBaseID: FBgn0041092
• Length: 2047
• Species: Drosophila melanogaster
• Sequence 2: XP_017444554.1
• Gene: Arntl / 29657
• RGDID: 62003
• Length: 633
• Species: Rattus norvegicus
• Alignment Length: 713
• Identity: 136/713 - (19%)
• Similarity: 237/713 - (33%)
• Gaps: 242/713 - (33%)

  Fly   236 SQINKCNNEKRRREAENGYIEQLSEIL-TLNKRGDMTSTKPDKAAILNQVVRTYREICDKGQNRD 299
            |||     |||||:..|.:|::|:.:: |.|    ..|.|.||..:|...|:..:.:  :|
  Rat    85 SQI-----EKRRRDKMNSFIDELASLVPTCN----AMSRKLDKLTVLRMAVQHMKTL--RG---- 134

  Fly   300 ISSTSTNNNNSTTTTNNNTNSNNNNNTSKPQATSTRCSRCATDNCSIHPVQQGEVSSTEPPLPEP 364
                         .||..|.:|     .||...|.
  Rat   135 -------------ATNPYTEAN-----YKPTFLSD------------------------------ 151

  Fly   365 SLLLGQVPEISAYFEALEHYI--SGVGWVLLQVNANGIIESCTQNIRDLIGYEKQELYHQPLYMY 427
                          :.|:|.|  :..|::.:.....|.|...::::..::.|.:.:|..|.|:.|
  Rat   152 --------------DELKHLILRAADGFLFVVGCDRGKILFVSESVFKILNYSQNDLIGQSLFDY 202

  Fly   428 LYSGDHAKLEPIINTMYNNPNGGNSNSANNSGPGGS--SAGTSAGVWGDLEELNNGNASQGSNSS 490
            |:..|.||::..:             |::::.|...  .|.|...|..|:..
  Rat   203 LHPKDIAKVKEQL-------------SSSDTAPRERLIDAKTGLPVKTDITP------------- 241

  Fly   491 GAGGLGGAGGAAAGKKRSISTKVR-----MLVKDTRTATQTSSNCEEK--------PLRQSGHQD 542
                  |.....:|.:||...:::     :.|:|...|    |.|.:|        .:..:|:..
  Rat   242 ------GPSRLCSGARRSFFCRMKCNRPSVKVEDKDFA----STCSKKKADRKSFCTIHSTGYLK 296

  Fly   543 KYEEVVLIAAPVKDDADASS-------SVLCLITRPEDESPLEINIQQHVQQQPIE--------Q 592
            .:       .|.|...|..|       ::.||:...        .:..|:..||:.        :
  Rat   297 SW-------PPTKMGLDEDSEPDNEGCNLSCLVAIG--------RLHSHMVPQPVNGEIRVKSME 346

  Fly   593 MTFKLDIHGKILTLD--PTALREPFKQHLQTWVGRLWQDLCHPHDLSTLKSHLRDI---QDSASA 652
            ...:..|.||.:.:|  .||:.....|.|   :|....:..|..|:..|....|.:   ::..:.
  Rat   347 YVSRHAIDGKFVFVDQRATAILAYLPQEL---LGTSCYEYFHQDDIGHLAECHRQVLQTREKITT 408

  Fly   653 NSPGAGAGTSVVSRPFRLRLGAPDVYVHVKANSRLFLNQTPGEGDFIMSVQTLLNSENDMNSSNT 717
            |           ...|:::.|:   ::.:::....|:|....|.::|:|..|::       .:|.
  Rat   409 N-----------CYKFKIKDGS---FITLRSRWFSFMNPWTKEVEYIVSTNTVV-------LANV 452

  Fly   718 GAGSGGLGLGQLCAMAPSPSLASSLLSS---------LSMDGLHGGT--GSGSSSSPAASGMLPT 771
            ..| |.....||.|   ||....|:|.|         .::.|:.|||  |:|......|..::..
  Rat   453 LEG-GDPTFPQLTA---SPHSMDSMLPSGEGGPKRTHPTVPGIPGGTRAGAGKIGRMIAEEIMEI 513

  Fly   772 HLLGGLVGGGQQGGGGNSTQTTSVGGPLMSS----AIING-------TGLQQQQQQQQRSGASSS 825
            |.:.   |......|.:....||...|..||    .|:||       .||...|.|:......|.
  Rat   514 HRIR---GSSPSSCGSSPLNITSTPPPDASSPGGKKILNGGTPDIPSAGLLPGQAQETPGYPYSD 575

  Fly   826 ASSSANALVNAFTASPAPAEHSFYGSDTFEFDIAAHSSSFE----------LDPSGGVGAWTD 878
            :||..             .|:...|.|..:.|..:.|.|.:          |:...|:|...|
  Rat   576 SSSIL-------------GENPHIGIDMIDNDQGSSSPSNDEAAMAVIMSLLEADAGLGGPVD 625

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
tai	NP_001245949.1	HLH	235..286	CDD:238036	18/50 (36%)
		PAS	377..442	CDD:214512	15/66 (23%)
		PAS_11	591..711	CDD:291273	22/132 (17%)
Arntl	XP_017444554.1	bHLH-PAS_ARNTL_PASD3	74..137	CDD:381444	20/79 (25%)
		PAS	156..215	CDD:214512	14/58 (24%)
		PAS_11	346..448	CDD:405306	22/118 (19%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_KOG3561
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	1	0.900