DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment tai and Ncoa3

DIOPT Version :9

Sequence 1:NP_001245949.1 Gene:tai / 34242 FlyBaseID:FBgn0041092 Length:2047 Species:Drosophila melanogaster
Sequence 2:NP_032705.2 Gene:Ncoa3 / 17979 MGIID:1276535 Length:1403 Species:Mus musculus


Alignment Length:1909 Identity:398/1909 - (20%)
Similarity:607/1909 - (31%) Gaps:722/1909 - (37%)


- Green bases have known domain annotations that are detailed below.


  Fly   242 NNEKRRREAENGYIEQLSEILTLNKRG-DMTSTKPDKAAILNQVVRTYREICDKGQNRDISSTST 305
            :.||.|||.|:.|||:|:|:::.|... |..:.||||.|||.:.||..|:|  |.|.:.|||   
Mouse    33 SGEKWRREQESKYIEELAELISANLSDIDNFNVKPDKCAILKETVRQIRQI--KEQGKTISS--- 92

  Fly   306 NNNNSTTTTNNNTNSNNNNNTSKPQATSTRCSRCATDNCSIHPVQQGEVSSTEPPLPEPSLLLGQ 370
                             :::..|...:||  .:...|..|:.|                 |||  
Mouse    93 -----------------DDDVQKADVSST--GQGVIDKDSLGP-----------------LLL-- 119

  Fly   371 VPEISAYFEALEHYISGVGWVLLQVNANGIIESCTQNIRDLIGYEKQELYHQPLYMYLYSGDHAK 435
                    :||:.:       |..||.:|.|...::|:...:.|::::|.:..:|..|:..|...
Mouse   120 --------QALDGF-------LFVVNRDGNIVFVSENVTQYLQYKQEDLVNTSVYSILHEQDRKD 169

  Fly   436 -LEPIINTMYNNPNGGNSNSANNSGPGGSSAGTSAGVWGDLEELNNGNASQGSNSSGAGGLGGAG 499
             |:.:..:..|..:..|.|.                                             
Mouse   170 FLKHLPKSTVNGVSWTNENQ--------------------------------------------- 189

  Fly   500 GAAAGKKRSISTKVRMLVK------DTRTATQTSSNCEEKPLRQSGHQDKYEEVVLIA-----AP 553
                 :::|.:...|||:|      |...:.:|              :.:||.:...|     |.
Mouse   190 -----RQKSHTFNCRMLMKTHDILEDVNASPET--------------RQRYETMQCFALSQPRAM 235

  Fly   554 VKDDADASSSVLCL---ITRPEDESPLEINIQQHVQQQPIEQMTFKLDIHGKILTLDPTALREPF 615
            :::..|....::|:   :|.|...|| |..|.:|             |:.||::.:|..:||...
Mouse   236 LEEGEDLQCCMICVARRVTAPFPSSP-ESFITRH-------------DLSGKVVNIDTNSLRSSM 286

  Fly   616 KQHLQTWVGRLWQDLCHPHDLS--TLKSHLRDIQDSASANSPGAGAGTSVVSRPFRLRLGAPDVY 678
            :...:..:.|..|.....:|..  :.|.|.::......|.:|           .:|..| |....
Mouse   287 RPGFEDIIRRCIQRFFSLNDGQSWSQKRHYQEAYVHGHAETP-----------VYRFSL-ADGTI 339

  Fly   679 VHVKANSRLFLNQTPGEGDFIMSVQTLLNSENDMNSSNTGAGSGGLGLGQLCAMAPSPSLASSLL 743
            |..:..|:||.|....:....:|...|...:|....:...||.|.......|.::.||:....::
Mouse   340 VSAQTKSKLFRNPVTNDRHGFISTHFLQREQNGYRPNPNPAGQGIRPPAAGCGVSMSPNQNVQMM 404

  Fly   744 SSLSMDGLHGGTGSGSSSSPAASGMLPTHLLGGLVGGGQQGGGGNSTQTTSVGGPLMSSAIINGT 808
                        ||.:...|..|..            ||.||.                      
Mouse   405 ------------GSRTYGVPDPSNT------------GQMGGA---------------------- 423

  Fly   809 GLQQQQQQQQRSGASSSASS--SANALVNAFTASPAPAEHSFYGSDTFEFDIAAHSSSFELDPSG 871
                      |.|||||.:|  ...:|     .||:..::|.||            .|....|.|
Mouse   424 ----------RYGASSSVASLTPGQSL-----QSPSSYQNSSYG------------LSMSSPPHG 461

  Fly   872 --GVGAWTDSRPNSRASVATPVSTPRPP-SGHGFSPAVCA-SPATPYQLSSHSAASLPSPQSNAS 932
              |:|      ||.:..:.:|.:...|. :.|.||||..| ||..|                   
Mouse   462 SPGLG------PNQQNIMISPRNRGSPKMASHQFSPAAGAHSPMGP------------------- 501

  Fly   933 AGGGNYGGFNFHSFDSSDVKPEKDVQQQQNQQQSNNNSS-----SSNPLLGGGLPNGVGGMLLSQ 992
              .||.|.   |||.||.:...:.:.:.......:..||     .::|.:....|:.|.|     
Mouse   502 --SGNTGS---HSFSSSSLSALQAISEGVGTSLLSTLSSPGPKLDNSPNMNISQPSKVSG----- 556

  Fly   993 QQQQQQTPPQQQQQQQQQESSERLRHLLTKSQSMAGGLGGLGDDEKYFKPEGSEEEKHASGGFKM 1057
              |..::|.....:|...|||      :.:|.|               :...||:|...|.| ::
Mouse   557 --QDSKSPLGLYCEQNPVESS------VCQSNS---------------RDHPSEKESKESSG-EV 597

  Fly  1058 GGQPGGMGMFGPMGSMGRGVGNSSMLHKAGNSQNPMLLKLLNEKSEDDDGNGSGGGPGSMNNSRQ 1122
            ...|.     ||:.|.|         ||       .||:||. .|.||.|:.|........|.:.
Mouse   598 SETPR-----GPLESKG---------HK-------KLLQLLT-CSSDDRGHSSLTNSPLDPNCKD 640

  Fly  1123 SELMRQLKNPDGGSHGMHRNSASGNMSTEDLKAMLKIQSDPSLNRKRSLNEPDDDPSAKRSEDKP 1187
            |.:  .:.:|.|.|     :|.||.:|:                               .|....
Mouse   641 SSV--SVTSPSGVS-----SSTSGTVSS-------------------------------TSNVHG 667

  Fly  1188 SKLCTQNKMLAKLLQN---PPKIPKAPNPEQPLQVKTLPDITSSTVSSTLAAPGNLISAGSTGPK 1249
            |.|..::::|.|||||   |.::.|                               |:|.:||..
Mouse   668 SLLQEKHRILHKLLQNGNSPAEVAK-------------------------------ITAEATGKD 701

  Fly  1250 AAANRNRKQQQQQQQQQQQQQQQQVAGIPSQQQQQQPNDVYLSQQQQQQLQSPQLAFQHQQLATT 1314
            .::..:..:...:|:|...::::..|.:.....:..|:|| |:::.|.|..|             
Mouse   702 TSSTASCGEGTTRQEQLSPKKKENNALLRYLLDRDDPSDV-LAKELQPQADS------------- 752

  Fly  1315 ATTSITTAASTSAAAAAAAAILGEGDSELSKLLDSV--MEYYPDDTPIVTNAPSEASAINDIQKS 1377
                                    |||:||:...|.  ......|..|.|....|.|...|...:
Mouse   753 ------------------------GDSKLSQCSCSTNPSSGQEKDPKIKTETNEEVSGDLDNLDA 793

  Fly  1378 LMLDVESAAFGNDLNQQLMMTQQQQHQQQQQQQQLLALQLAQQQQQQRQQHLQQPPAYPGMLNMQ 1442
            ::.|:.|:.|.|:       .....|...:||..                      |.|..|.::
Mouse   794 ILGDLTSSDFYNN-------PTNGGHPGAKQQMF----------------------AGPSSLGLR 829

  Fly  1443 QQQHQQQQQQNQQHIMQRLEAMRNQGNQGFQRPPPMYPARGRGPMNAVATPGGVVLPAQQQLRNI 1507
            ..              |.::::|...|:......|:....|....|..|.||   ||.|..|.. 
Mouse   830 SP--------------QPVQSVRPPYNRAVSLDSPVSVGSGPPVKNVSAFPG---LPKQPILAG- 876

  Fly  1508 RQQQQLAAAQQKERLLQQQQKQQLLVPENASEYWGNSNLQLIIKLIVSYILAGMNAGLNNIGSLL 1572
                       ..|::..|:..                              |.|.|.|.     
Mouse   877 -----------NPRMMDSQENY------------------------------GANMGPNR----- 895

  Fly  1573 NTTGAPNVSLSRTNLPSDAQLSPNFAQTLMQQQLSP-GRS-APYS---PQPNQ-GYAPQFP---- 1627
                  ||.::.|:.|.|..|:.:.|..:.....|| ||: |.||   |:|.. |..|..|    
Mouse   896 ------NVPVNPTSSPGDWGLANSRASRMEPLASSPLGRTGADYSATLPRPAMGGSVPTLPLRSN 954

  Fly  1628 -QPGQRLSPQQQQQLSQQQQNNVQQQQLAYQQQQVGDGGRSNT---PFGSNSGMQSPGM-QNSPQ 1687
             .||.|.|.|||||..||||...||||...||||.....:..|   |.|......||.: .|.|.
Mouse   955 RLPGARPSLQQQQQQQQQQQQQQQQQQQQQQQQQQQQMLQMRTGEIPMGMGVNPYSPAVPSNQPG 1019

  Fly  1688 QWGSGGGGGGGPGGPL-----PSGNAGRTLQQHNPMLIAQLQGV--SPYNARQYQQNQR------ 1739
            .|         |.|.|     |.|:      |:.|:|...|..:  .|.|| :.|.::|      
Mouse  1020 SW---------PEGMLSMEQGPHGS------QNRPLLRNSLDDLLGPPSNA-EGQSDERALLDQL 1068

  Fly  1740 ----------------RGLNSPGAVGPGGNPAAQAALQRQNSFQGQGGGGATTPDGSGVGFG--- 1785
                            |.|..|..|..|     ||...:|:.||||  ..|...|.....:|   
Mouse  1069 HTLLSNTDATGLEEIDRALGIPELVNQG-----QALESKQDVFQGQ--EAAVMMDQKAALYGQTY 1126

  Fly  1786 ---GPQSPYGTNVNVFQQQ------QLQRLQRQGSVPQATQHLPGSPRFG------SSP------ 1829
               ||....|.|:   |.|      .:.::.:|||.|....|    ||.|      ::|      
Mouse  1127 PAQGPPLQGGFNL---QGQSPSFNSMMGQISQQGSFPLQGMH----PRAGLVRPRTNTPKQLRMQ 1184

  Fly  1830 ------GSSNNTDSSAA--------AG--------------NQQQQQQQQQQQQQQHQQQQHQQL 1866
                  |......|..|        ||              |.|...||:::....|.|||...:
Mouse  1185 LQQRLQGQQFLNQSRQALEMKMENPAGTAVMRPMMPQQAFFNAQMAAQQKRELMSHHLQQQRMAM 1249

  Fly  1867 M----NGLSMSPHPH------------------------PHPAMMGVG-------GMGSGGGNGI 1896
            |    ...:.||.|:                        |:||..|:|       |.||...:.:
Mouse  1250 MMSQPQPQAFSPPPNVTASPSMDGVLAGSAMPQAPPQQFPYPANYGMGQPPEPAFGRGSSPPSAM 1314

  Fly  1897 IGLGGGGGNYGATLGGYGQSQQANDFYGRAQTAG-GGGSVAGGNANSEFVKQELRAVVSVRAQQA 1960
            :     ....|.:.....|..|....|..:...| ..|::|   .|..|.:|:.       |.|.
Mouse  1315 M-----SSRMGPSQNAMVQHPQPTPMYQPSDMKGWPSGNLA---RNGSFPQQQF-------APQG 1364

  Fly  1961 AAAATGGAGV---GGGVAQRGQTP 1981
            ..||.....:   ||.:.|...||
Mouse  1365 NPAAYNMVHMNSSGGHLGQMAMTP 1388

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
taiNP_001245949.1 HLH 235..286 CDD:238036 20/44 (45%)
PAS 377..442 CDD:214512 14/65 (22%)
PAS_11 591..711 CDD:291273 23/121 (19%)
Ncoa3NP_032705.2 bHLH_SF 33..102 CDD:381792 30/90 (33%)
PAS 117..172 CDD:214512 16/71 (23%)
PAS_11 262..372 CDD:373151 26/134 (19%)
NCOA_u2 451..564 CDD:374708 36/161 (22%)
SRC-1 608..696 CDD:370145 33/173 (19%)
DUF4927 714..801 CDD:374467 23/124 (19%)
Nuc_rec_co-act 1056..1103 CDD:312376 9/51 (18%)
Med15 1094..>1398 CDD:312941 70/324 (22%)
DUF1518 1270..1326 CDD:369380 9/60 (15%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167837738
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3561
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR10684
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
43.930

Return to query results.
Submit another query.