DRSC/TRiP Functional Genomics Resources

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Protein Alignment tai and Ncoa1

DIOPT Version :10

Sequence 1:NP_001245949.1 Gene:tai / 34242 FlyBaseID:FBgn0041092 Length:2047 Species:Drosophila melanogaster
Sequence 2:NP_001395531.1 Gene:Ncoa1 / 17977 MGIID:1276523 Length:1447 Species:Mus musculus


Alignment Length:1813 Identity:364/1813 - (20%)
Similarity:597/1813 - (32%) Gaps:597/1813 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly   242 NNEKRRREAENGYIEQLSEILTLNKRG-DMTSTKPDKAAILNQVVRTYREICDKGQNRDISSTST 305
            :.||||||.||.|:|:|:|:|:.|... |..|.||||..||.:.|             |......
Mouse    30 STEKRRREQENKYLEELAELLSANISDIDSLSVKPDKCKILKKTV-------------DQIQLMK 81

  Fly   306 NNNNSTTTTNNNTNSNNNNNTSKPQATSTRCSRCATDNCSIHPVQQGEVSSTEPPLPE-----PS 365
            ......:||:::                               ||:.::||:...:.|     |.
Mouse    82 RMEQEKSTTDDD-------------------------------VQKSDISSSSQGVIEKESLGPL 115

  Fly   366 LLLGQVPEISAYFEALEHYISGVGWVLLQVNANGIIESCTQNIRDLIGYEKQELYHQPLYMYLYS 430
            ||           |||:.:       ...||..|.|...::|:...:||.::||.:..:|..|:.
Mouse   116 LL-----------EALDGF-------FFVVNCEGRIVFVSENVTSYLGYNQEELMNTSVYSILHV 162

  Fly   431 GDHAKLEPIINTMYNNPNGGNSNSANNSGPGGSSAGTSAGVWGDLEELNNGNASQGSNSSGAGGL 495
            ||||  |.:.|.:        ..|..|..|           |..                     
Mouse   163 GDHA--EFVKNLL--------PKSLVNGVP-----------WPQ--------------------- 185

  Fly   496 GGAGGAAAGKKRSISTKVRMLV---KDTRTATQTSSNCEEKPLRQSGHQDKYE--EVVLIAAP-- 553
                  .|.::.|.:...|||:   :|..|..|.:  |:           :||  :...::.|  
Mouse   186 ------EATRRNSHTFNCRMLIHPPEDPGTENQEA--CQ-----------RYEVMQCFTVSQPKS 231

  Fly   554 VKDDADASSSVLCLITRPEDESPLEINIQQHVQQQPIEQMTFKLDIHGKILTLDPTALREPFKQH 618
            :::|.:...|.|..|.|.....|....::..:.:|         |..|||:::|.::||.     
Mouse   232 IQEDGEDFQSCLICIARRLPRPPAITGVESFMTKQ---------DTTGKIISIDTSSLRA----- 282

  Fly   619 LQTWVGRL-WQDLCHP----------HDLSTLKSHLRDIQDSASANSPGAGAGTSVVSRPFRLRL 672
                .||. |:||...          .:.|..:...:::....:|:||         |..|.|..
Mouse   283 ----AGRTGWEDLVRKCIYAFFQPQGREPSYARQLFQEVMTRGTASSP---------SYRFILND 334

  Fly   673 GAPDVYVHVKANSRLFLNQTPGEGDFIMSVQTL------LNSENDMNSS----------NTGAGS 721
            |.. :..|.|.  :|...|:|....|||.:..:      |:.::|.||.          |.|. |
Mouse   335 GTM-LSAHTKC--KLCYPQSPDMQPFIMGIHIIDREHSGLSPQDDSNSGMSIPRINPSVNPGI-S 395

  Fly   722 GGLGLGQLCAMAPS-PSLASSLLSSLSMDGLHGGTG-SGSSSSPAASGMLPTHLLGGLVGGGQ-- 782
            ...|:.:...:.|| .::.|:.::......|:..:. :.||::....|..|         |.|  
Mouse   396 PAHGVTRSSTLPPSNNNMVSARVNRQQSSDLNSSSSHTNSSNNQGNFGCSP---------GNQIV 451

  Fly   783 ------QGGGGNSTQTTSVGGPLMSSAIINGTGLQQQQQQQQRSGASSSASSSANALVNAFTASP 841
                  ||..|:.:...|:.   ::::.:.|||:...|....|..|:|..::.|....|:|..: 
Mouse   452 ANVALNQGQAGSQSSNPSLN---LNNSPMEGTGIALSQFMSPRRQANSGLATRARMSNNSFPPN- 512

  Fly   842 APAEHSFYGSDTFEFDIAAHSSSFELDPSGGVGAWTDSRPNSRASVATPVSTPR-----PPSGHG 901
            .|...|..|..:                    ||..:   |:|:....||::.:     |.:..|
Mouse   513 IPTLSSPVGITS--------------------GACNN---NNRSYSNIPVTSLQGMNEGPNNSVG 554

  Fly   902 FSPAVCASPATPYQLSSHSAASLPSPQSNASAGGGNYGGFNFHSFDSSDVKPEKDVQQQQNQQ-Q 965
            ||   ..||......|.:|.:.|....:.|.:                  |..|::....|:. |
Mouse   555 FS---AGSPVLRQMSSQNSPSRLSMQPAKAES------------------KDSKEIASILNEMIQ 598

  Fly   966 SNNNSSSSN---PLLGGGLPN----GVGGMLLSQQQQQ--QQTPPQQQQQQQQQESSERLRHLL- 1020
            |:|:.:|:|   ||..|.|.|    ..|....||...:  |......:||.:..:.....:.:| 
Mouse   599 SDNSDNSANEGKPLDSGLLHNNDRLSEGDSKYSQTSHKLVQLLTTTAEQQLRHADIDTSCKDVLS 663

  Fly  1021 ---TKSQSMAGGLGGLGDDEKYFKPEGSEEEKHASGGFKMGGQPGGMGMFGPMGSMGRGVGNSSM 1082
               |.|.:.:...||.....     ..|..|:|                              .:
Mouse   664 CTGTSSSASSNPSGGTCPSS-----HSSLTERH------------------------------KI 693

  Fly  1083 LHKAGNSQNPMLLKLLNEKSEDDDG---------NGSGGGPGSM---------NNSRQSELMRQL 1129
            ||:.....:|..:..|:.:.|..|.         :|...|..|:         ..|:..:|:|.|
Mouse   694 LHRLLQEGSPSDITTLSVEPEKKDSVPASTAVSVSGQSQGSASIKLELDAAKKKESKDHQLLRYL 758

  Fly  1130 KNPDGGSHGMHRNSASGNMSTEDLKAML--KIQSDPSLNRKRSLNEPDDD--------------- 1177
            .:.|...     ..::.|:..:|:|..:  |.|.||.......:.:|..:               
Mouse   759 LDKDEKD-----LRSTPNLCLDDVKVKVEKKEQMDPCNTNPTPMTKPAPEEVKLESQSQFTADLD 818

  Fly  1178 ------PSAKRSEDKPSKLCTQNKMLAKLLQNPPKIPKAPNPEQPL------QVKTLPDITSSTV 1230
                  |:.:::...|| ||..::|...:.....|....|...||.      ::..||::....:
Mouse   819 QFDQLLPTLEKAAQLPS-LCETDRMDGAVTGVSIKAEVLPASLQPTTARAAPRLSRLPELELEAI 882

  Fly  1231 SSTLAAPGNLISAGSTGPKA-----AANRNRKQQQQQQQQQQQQQQQQVAGIPSQQQQQQPNDVY 1290
            .:....||    ||...|.|     ..|:|:                             |.|..
Mouse   883 DNQFGQPG----AGDQIPWANNTLTTINQNK-----------------------------PEDQC 914

  Fly  1291 LSQQQQQQLQSPQLAFQHQQLATTATTSITTAASTSAAAAAAAAIL-GEGDSELSKL-------- 1346
            :|.|..:.|..|              |::.......|......:.| |:.::||::|        
Mouse   915 ISSQLDELLCPP--------------TTVEGRNDEKALLEQLVSFLSGKDETELAELDRALGIDK 965

  Fly  1347 ------LDSVMEYYP----------DDTPIV----TNAPSEASAINDIQKSLMLDVESAAFGNDL 1391
                  ||.:.|.:|          :|.|.:    .::||..:.:            |..|    
Mouse   966 LVQGGGLDVLSERFPPQQATPPLMMEDRPTLYSQPYSSPSPTAGL------------SGPF---- 1014

  Fly  1392 NQQLMMTQQQQHQQQQQQQQLLALQLAQQQQQQRQQHLQQPPAYPGMLNMQQQQHQQQQQ----Q 1452
              |.|:.|:........|........:.....|.:|.|.:|||.|..|.:|.||..|.||    |
Mouse  1015 --QGMVRQKPSLGAMPVQVTPPRGTFSPNMGMQPRQTLNRPPAAPNQLRLQLQQRLQGQQQLMHQ 1077

  Fly  1453 NQQHIMQRLEAMRNQG---NQGFQR---PPPMYPARGRGPMNAVATPGGVVLPAQQQLRNIRQQQ 1511
            |:|.|:.:..|....|   ..|.|:   |.|        |:||            |.|  .::|:
Mouse  1078 NRQAILNQFAANAPVGMNMRSGMQQQITPQP--------PLNA------------QML--AQRQR 1120

  Fly  1512 QLAAAQQKERLLQQQQKQQLL-----------------------VPENASE-------YWGNSNL 1546
            :|.:.|.::|.:.|||:..|:                       :|:.|.:       |..|...
Mouse  1121 ELYSQQHRQRQIIQQQRAMLMRHQSFGNNIPPSSGLPVQMGTPRLPQGAPQQFPYPPNYGTNPGT 1185

  Fly  1547 QLIIKLIVSYILAGMNAGLNNIGSLLNTTGAPNVSLSRTNLPSDAQLSPNFAQTLMQQQ---LSP 1608
            ........|.:.|...|.|....|::|...|.|:...     ..|.:||...|.:.|..   |.|
Mouse  1186 PPASTSPFSQLAANPEASLATRSSMVNRGMAGNMGGQ-----FGAGISPQMQQNVFQYPGPGLVP 1245

  Fly  1609 GRSAPYSPQPNQGYAPQFPQPGQRLSPQQQQQLSQQQQNNVQQ--QQLAYQQQQVGDGGRSNTPF 1671
            ...|.::|..:.| :...|.|   :.|.|...|.|....:..|  ...|:||..:|:....:...
Mouse  1246 QGEATFAPSLSPG-SSMVPMP---VPPPQSSLLQQTPPTSGYQSPDMKAWQQGTMGNNNVFSQAV 1306

  Fly  1672 GSNSGMQSPGMQNSPQQWGSGGGGGGGPGGPLPSGNAGRTLQQHNPMLIAQLQGVSPYNARQYQQ 1736
            .|......||:.|:.....|..|           |||  .:|..|||:               .|
Mouse  1307 QSQPAPAQPGVYNNMSITVSMAG-----------GNA--NIQNMNPMM---------------GQ 1343

  Fly  1737 NQRRGLNSPGAVGPGGNPAAQAALQRQNSFQGQGGGG---ATTPDGSGVGFGGPQSPYGTNVNVF 1798
            .|...|..||............||:....:..|....   .|..||:                  
Mouse  1344 MQMSSLQMPGMNTVCSEQMNDPALRHTGLYCNQLSSTDLLKTDADGN------------------ 1390

  Fly  1799 QQQQLQRLQRQGSVPQATQHLPGSPRFGSSPGSSNNTDSSAAAGNQQQQQQQQQQQQQ 1856
              ||:|::|....| |.|.:|.|...:.:.||....  ....:|.|..|.||:...||
Mouse  1391 --QQVQQVQVFADV-QCTVNLVGGDPYLNQPGPLGT--QKPTSGPQTPQAQQKSLLQQ 1443

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
taiNP_001245949.1 bHLH_SF 239..291 CDD:469605 23/49 (47%)
PAS 377..442 CDD:214512 19/64 (30%)
PAS_11 590..711 CDD:464214 29/137 (21%)
Ncoa1NP_001395531.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..39 6/8 (75%)
bHLH-PAS_NCoA1_SRC1 27..87 CDD:381518 24/69 (35%)
LXXLL motif 1 46..50 2/3 (67%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 83..105 6/52 (12%)
LXXLL motif 2 112..116 1/3 (33%)
PAS 120..213 CDD:238075 29/147 (20%)
PAS_11 259..370 CDD:464214 29/140 (21%)
Interaction with STAT3 361..568 47/246 (19%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 368..446 15/78 (19%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 459..478 3/21 (14%)
NCOA_u2 469..591 CDD:465223 32/169 (19%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 548..632 24/104 (23%)
SRC-1 633..712 CDD:462615 15/113 (13%)
LXXLL motif 3 637..641 1/3 (33%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 663..688 5/29 (17%)
LXXLL motif 4 694..698 2/3 (67%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 700..735 6/34 (18%)
DUF4927 747..824 CDD:465083 13/81 (16%)
LXXLL motif 5 755..759 1/3 (33%)
Interaction with CREBBP. /evidence=ECO:0000269|PubMed:8616895 787..994 41/254 (16%)
LXXLL motif 6 919..923 0/3 (0%)
Nuc_rec_co-act 930..975 CDD:462608 8/44 (18%)
Med15 980..>1366 CDD:312941 99/462 (21%)
DUF1518 1155..1211 CDD:462174 9/55 (16%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1166..1195 4/28 (14%)
DUF1518 1218..1274 CDD:462174 15/64 (23%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1268..1287 5/18 (28%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1415..1447 9/31 (29%)
LXXLL motif 7 1441..1445 2/3 (67%)

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