Sequence 1: | NP_001245949.1 | Gene: | tai / 34242 | FlyBaseID: | FBgn0041092 | Length: | 2047 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001276755.1 | Gene: | Clock / 12753 | MGIID: | 99698 | Length: | 855 | Species: | Mus musculus |
Alignment Length: | 1231 | Identity: | 223/1231 - (18%) |
---|---|---|---|
Similarity: | 371/1231 - (30%) | Gaps: | 486/1231 - (39%) |
- Green bases have known domain annotations that are detailed below.
Fly 237 QINKCNNEKRRREAENGYIEQLSEILTLNKRGDMTSTKPDKAAILNQVV---RTYREICDKGQNR 298
Fly 299 DISSTSTNNNNSTTTTNNNTNSNNNNNTSKPQATSTRCSRCATDNCSIHPVQQGEVSSTEPPLPE 363
Fly 364 PSLLLGQVPEISAYFEALEHYISGVGWVLLQVNANGIIESCTQNIRDLIGYEKQELYHQPLYMYL 428
Fly 429 YSGDHAKLEPIINTMYNNPNGGNSNSANNSGPGGSSAGTSAGVWGDLEELNNGNASQGSNSSGAG 493
Fly 494 GLGGAGGAAAGKKRSISTKVRMLVK-DTRTATQTSSNCEEKPLRQSGHQDKYEEVVLIAAPVKDD 557
Fly 558 ADASSSVLCLITRPEDESPLEINIQQHVQQQPIEQMTFKLDIHGKILTLD----PTALREPFKQH 618
Fly 619 LQTWVGRLWQDLCHPHDLSTL-KSHLRDIQDSASANSPGAGAGTSVVSRPFRLRLGAPDVYVHVK 682
Fly 683 ANSRLFLNQTPGEGDFIMSVQTLLNSENDMNSSNTGAGSGGLGLGQLCAMAPSPSLASSLLSSLS 747
Fly 748 MDGLHGGTGSGSSSSPAASGMLPTHLLGGLVGGGQQGGGGNSTQTTSVGGPLMSSAIINGTGLQQ 812
Fly 813 QQQQQQRSGASSSASSSANALVNAFTASPAPAEHSFYGSDTFEFDIAAHSSSFELDPSGGVGAWT 877
Fly 878 DSRPNSRASVATPVSTP--------RPPSGHGFSPAVCASPATPYQLSSHSAASLPSPQSNASAG 934
Fly 935 GGNYGGFNFHSFDSSDVKPEKDVQQQQNQQQSNNNSSSSNPLLGGGLPNG---------VGGMLL 990
Fly 991 SQQQQQQQTPPQQQQQQQQQESSERLRHLLTKSQSMAGGLGGLGDDEKYFKPEGSEEEKHASGGF 1055
Fly 1056 KMGGQPGGMGMFGPMGSMGRGVGNSSMLHKAGNSQNPMLLKLLNEKSEDDDGNGSGGGPGSMNNS 1120
Fly 1121 RQSELMRQLKNPDGGSHGMHRNSASGNMSTEDLKAMLKIQSDPSLNRKRSLNEPDDDPSAKRSED 1185
Fly 1186 KPSKLCTQNKMLAKLLQNPPKIPKAPNPEQPLQVKTLPD----------------ITSSTVSSTL 1234
Fly 1235 AAP-----GNLISA---GSTGPKAAANRNRKQQQQQQQQQ--QQQQQQQVAGIPSQQQQ----QQ 1285
Fly 1286 PNDVYLSQQQQQQLQSPQLAFQHQQLATTATTSITTAASTSAAAAAAAAILGEGDSELSKLLDSV 1350
Fly 1351 MEYYPDDTPIVTNAPSEASAINDIQKSLMLDVESAAFGNDLNQQLM-MTQQQQHQQQQQQQ 1410 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
tai | NP_001245949.1 | HLH | 235..286 | CDD:238036 | 14/51 (27%) |
PAS | 377..442 | CDD:214512 | 12/64 (19%) | ||
PAS_11 | 591..711 | CDD:291273 | 28/124 (23%) | ||
Clock | NP_001276755.1 | bHLH-PAS_CLOCK | 29..89 | CDD:381577 | 17/81 (21%) |
Nuclear localization signal. /evidence=ECO:0000269|PubMed:19414601 | 32..47 | 2/10 (20%) | |||
PAS | 109..>177 | CDD:366402 | 15/91 (16%) | ||
PAS_11 | 274..377 | CDD:373151 | 27/121 (22%) | ||
Interaction with NR3C1. /evidence=ECO:0000269|PubMed:19141540 | 371..854 | 141/758 (19%) | |||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 392..411 | 6/61 (10%) | |||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 420..497 | 25/134 (19%) | |||
Interaction with SIRT1. /evidence=ECO:0000269|PubMed:18662547 | 450..570 | 35/195 (18%) | |||
Implicated in the circadian rhythmicity | 514..564 | 13/85 (15%) | |||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 613..650 | 9/60 (15%) | |||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 752..791 | 24/41 (59%) | |||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 814..855 | 13/26 (50%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_KOG3561 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 0 | 0.000 | Not matched by this tool. | |||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
1 | 0.900 |