DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Or30a and Or92a

DIOPT Version :10

Sequence 1:NP_523520.2 Gene:Or30a / 34236 FlyBaseID:FBgn0032096 Length:377 Species:Drosophila melanogaster
Sequence 2:NP_524414.2 Gene:Or92a / 42425 FlyBaseID:FBgn0038798 Length:408 Species:Drosophila melanogaster


Alignment Length:397 Identity:78/397 - (19%)
Similarity:140/397 - (35%) Gaps:88/397 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    33 RRYVAMTPYIIINCTQYVDIYLSTESLDFIIRNVYLAVLFTNTVVRGVL------------LCVQ 85
            |||: :..|:::....: :.|:..|...||:..:....|...|.|...:            |.|.
  Fly    45 RRYL-LRFYLVLGFLNF-NAYVVGEIAYFIVHIMSTTTLLEATAVAPCIGFSFMADFKQFGLTVN 107

  Fly    86 RFSYERFINILKS-FYIELLQSDDPIINILVKETTRLSVLISRINLLMGCCT-CIGFVTYPIFGS 148
            |....|.::.||. |.::|.......::...|...|:..|.:.:     |.| ...|..||...|
  Fly   108 RKRLVRLLDDLKEIFPLDLEAQRKYNVSFYRKHMNRVMTLFTIL-----CMTYTSSFSFYPAIKS 167

  Fly   149 ERVLPYGMYLPTIDEYKYASPYYEIFFVIQAIMAP----------------MGCCMYIPYTNMVV 197
                       ||..|...|..:|..:... |:.|                :..|.|:...:.|.
  Fly   168 -----------TIKYYLMGSEIFERNYGFH-ILFPYDAETDLTVYWFSYWGLAHCAYVAGVSYVC 220

  Fly   198 TFTLFAILMCRVLQH--------------------KLRSLEKLKNEQVRGEIIWCIKYQLKLSGF 242
            ...|....:.::..|                    .::.|..|            :.|..:....
  Fly   221 VDLLLIATITQLTMHFNFIANDLEAYEGGDHTDEENIKYLHNL------------VVYHARALDL 273

  Fly   243 VDSMNALNTHLHLVEFLCFGAMLCVLLFSLIIAQTIAQTVIVIAYMVMIFANSV---VLYYVANE 304
            .:.:|.:.:.|.|..|:....::|...|.:    |.:....::.|.:...|:.|   |:.|..:|
  Fly   274 SEEVNNIFSFLILWNFIAASLVICFAGFQI----TASNVEDIVLYFIFFSASLVQVFVVCYYGDE 334

  Fly   305 LYFQSFDIAIAAYESNWMDFDVDTQKTLKFLIMRSQKPLAILVGGTYPMNLKMLQSLLNAIYSFF 369
            :...|..|..:|:..||:......::.|:|:|.|||||.:|......|::......:::..|.||
  Fly   335 MISSSSRIGHSAFNQNWLPCSTKYKRILQFIIARSQKPASIRPPTFPPISFNTFMKVISMSYQFF 399

  Fly   370 TLLRRVY 376
            .|||..|
  Fly   400 ALLRTTY 406

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Or30aNP_523520.2 7tm_6 58..366 CDD:251636 65/360 (18%)
Or92aNP_524414.2 7tm_6 80..396 CDD:251636 63/348 (18%)

Return to query results.
Submit another query.