DRSC/TRiP Functional Genomics Resources

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Protein Alignment Or30a and Or13a

DIOPT Version :10

Sequence 1:NP_523520.2 Gene:Or30a / 34236 FlyBaseID:FBgn0032096 Length:377 Species:Drosophila melanogaster
Sequence 2:NP_523359.2 Gene:Or13a / 32562 FlyBaseID:FBgn0030715 Length:418 Species:Drosophila melanogaster


Alignment Length:438 Identity:96/438 - (21%)
Similarity:161/438 - (36%) Gaps:107/438 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 VEMPIFGSTLKLMKFWSYL-FVHNWR-------RYVAMTPYIIINCTQYVDIYLSTESLDFIIRN 65
            :..||....|||...|... ....||       .|:....|:|.:    |.|.:|.::. |::.|
  Fly    10 LSFPIQCVWLKLNGSWPLTESSRPWRSQSLLATAYIVWAWYVIAS----VGITISYQTA-FLLNN 69

  Fly    66 VYLAVLFTN---TVVRGVLLCVQ----RFSYERFINILKSFYIELLQSDDPIINILVKETTRLSV 123
            :...::.|.   |...|||..|:    |.:..:|..::::|..|:...:....|: ..|..|..|
  Fly    70 LSDIIITTENCCTTFMGVLNFVRLIHLRLNQRKFRQLIENFSYEIWIPNSSKNNV-AAECRRRMV 133

  Fly   124 LISRINLLMGCCTCIGFVTYPI----FG-----SERVLPYGMYLPTIDEYKYASPYYEIFFVIQA 179
            ..|.:..|: .|..|.:...|:    ||     ..:..||.|..|    |...|.:      |:.
  Fly   134 TFSIMTSLL-ACLIIMYCVLPLVEIFFGPAFDAQNKPFPYKMIFP----YDAQSSW------IRY 187

  Fly   180 IMAPMGCCMYIPYTNMVVTFTLFA-----------------ILMCRV----------------LQ 211
            :|.    .::..|..:.|..||||                 :|..|:                |:
  Fly   188 VMT----YIFTSYAGICVVTTLFAEDTILGFFITYTCGQFHLLHQRIAGLFAGSNAELAESIQLE 248

  Fly   212 HKLRSLEKLKNEQVRGEIIWCIKYQLKLSGFVDSMNALNTHLHLVEFLCFGAMLCVLLFSLIIAQ 276
            ...|.:||..|         .|.:..:|..|.:.       :.|...:....::|::.|.::..:
  Fly   249 RLKRIVEKHNN---------IISFAKRLEDFFNP-------ILLANLMISSVLICMVGFQIVTGK 297

  Fly   277 T--IAQTVIVIAYMVMIFANSVVLYYVANELYFQSFDIAIAAYESNWMDFD-------VDTQKTL 332
            .  |...|..|.|:....:...||....:.|..||...|...||..|...|       ..|.|.:
  Fly   298 NMFIGDYVKFIIYISSALSQLYVLCENGDALIKQSTLTAQILYECQWEGSDRIEIQSFTPTTKRI 362

  Fly   333 K----FLIMRSQKPLAILVGGTYPMNLKMLQSLLNAIYSFFTLLRRVY 376
            :    |:|:.||:|:.|.......::|:...::|:...|:|||||.||
  Fly   363 RNQIWFMILCSQQPVRITAFKFSTLSLQSFTAILSTSISYFTLLRSVY 410

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Or30aNP_523520.2 7tm_6 58..366 CDD:251636 74/369 (20%)
Or13aNP_523359.2 7tm_6 78..399 CDD:251636 71/352 (20%)

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