DRSC/TRiP Functional Genomics Resources

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Protein Alignment Toll-4 and RLM3

DIOPT Version :10

Sequence 1:NP_523519.2 Gene:Toll-4 / 34235 FlyBaseID:FBgn0032095 Length:1125 Species:Drosophila melanogaster
Sequence 2:NP_001329873.1 Gene:RLM3 / 827407 AraportID:AT4G16990 Length:801 Species:Arabidopsis thaliana


Alignment Length:502 Identity:86/502 - (17%)
Similarity:149/502 - (29%) Gaps:182/502 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly   631 KTTLYLDRNEIRKLTNTESLVVAGHAS---IHKLHMSQNLLRELPLH----LLPENITYLDVRNN 688
            |..:...:.|:.|..|...:...|..|   .|::.......:..|.|    |..|.......|..
plant   311 KIVVITQKRELLKAHNIAHVYEVGFPSEELAHQMFCRYAFGKNSPPHGFNELADEAAKIAGNRPK 375

  Fly   689 LLKYL---------DDGVIAFLEYRENITKIELSGNPWE--------C-----NCKAKA------ 725
            .|||:         :..|....|:|.|..|:::|.:..:        |     |.:.||      
plant   376 ALKYVGSSFRRLDKEQWVKMLSEFRSNGNKLKISYDELDGKGQDYVACLTNGSNSQVKAEWIHLA 440

  Fly   726 ---------------FLSFLRRHEPMEYETVLRRVEITDDKCPEDCICCVDTSNSDSLAYVVDCS 775
                           .|..|..:..|..:..:...|..:..|.:..||.:|:|.....:....||
plant   441 LGVSILLNIRSDGTTILKHLSYNRSMAQQAKIWWYENLERVCKKYNICGIDSSTDGGGSTYGQCS 505

  Fly   776 -------------GKELSEIPQLPTPTYGQ---------------TTLVF----------ERNSL 802
                         |.:.|......:|...|               |..:|          |.:|.
plant   506 NSQFQRNMDASPGGNKTSNQSTKDSPRASQVEKEKIEYCEPHVYITPAIFSDGTRAPKYVESSSR 570

  Fly   803 KK---------WPSSLLPGYSSVTRFYLAHNRLSDIDQL---PDKLEYLDISNNNFSALDDRVRG 855
            :.         ||       .:..:.|..||.:..||:.   .||.|  ..|..:...||.:.:|
plant   571 RVTQVHHAKTWWP-------ENCEKVYENHNNIYGIDRSIDGGDKFE--GKSKVSDGGLDGKDQG 626

  Fly   856 FLQKRMNSSQLQLSLFGNPWTCRCEDKDFLVFVKEQAKNIANASA--------IQC--------- 903
            .:..:.::|:||:::..:  ..|||....::|   :..|:.:.:|        :.|         
plant   627 SMYGQSSNSELQINMDAD--NRRCEPVSEMLF---KNYNVCSPNAHMPAGLTDVNCSNPQSQRKL 686

  Fly   904 -------------IDTG----------RSLIEVEETDICPSVLIYYTSLAVSLLIIALSINVFIC 945
                         |.||          :|::...:.|   .....|....|.:.:..||..:.:.
plant   687 DASLKKDKIVHEWIRTGSGFFFDFQGPKSIVSAAQVD---EKNFEYCEQGVYITLGILSGGIIVL 748

  Fly   946 --------FRQPIMIW--------FYEHEICLSLAARRELDEDKKYD 976
                    ..|...:|        :.||.||         ..||.:|
plant   749 KHLEFSRRMAQQAKVWWSENWIKVYQEHNIC---------GIDKSFD 786

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Toll-4NP_523519.2 LRR 210..>470 CDD:443914
leucine-rich repeat 264..287 CDD:275380
leucine-rich repeat 288..308 CDD:275380
leucine-rich repeat 309..334 CDD:275380
leucine-rich repeat 335..386 CDD:275380
PRK15370 <381..>482 CDD:185268
leucine-rich repeat 388..408 CDD:275380
leucine-rich repeat 412..432 CDD:275378
LRR <416..591 CDD:443914
leucine-rich repeat 433..454 CDD:275378
leucine-rich repeat 455..478 CDD:275378
leucine-rich repeat 479..490 CDD:275378
leucine-rich repeat 632..657 CDD:275378 4/24 (17%)
leucine-rich repeat 658..679 CDD:275378 4/24 (17%)
leucine-rich repeat 680..706 CDD:275378 7/34 (21%)
PCC 684..>771 CDD:188093 23/129 (18%)
leucine-rich repeat 707..719 CDD:275378 2/19 (11%)
leucine-rich repeat 771..791 CDD:275380 5/32 (16%)
PRK15370 <793..>877 CDD:185268 21/105 (20%)
leucine-rich repeat 793..815 CDD:275378 6/40 (15%)
leucine-rich repeat 816..835 CDD:275378 5/21 (24%)
leucine-rich repeat 836..859 CDD:275378 5/22 (23%)
TIR 974..1110 CDD:214587 1/3 (33%)
RLM3NP_001329873.1 PLN03210 1..>449 CDD:215633 25/137 (18%)
BRX 433..485 CDD:429960 7/51 (14%)
BRX 537..593 CDD:429960 7/62 (11%)
BRX 723..776 CDD:429960 7/55 (13%)
Blue background indicates that the domain is not in the aligned region.

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