DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Toll-4 and fgfr2

DIOPT Version :9

Sequence 1:NP_523519.2 Gene:Toll-4 / 34235 FlyBaseID:FBgn0032095 Length:1125 Species:Drosophila melanogaster
Sequence 2:XP_005169609.1 Gene:fgfr2 / 352940 ZFINID:ZDB-GENE-030323-1 Length:836 Species:Danio rerio


Alignment Length:384 Identity:77/384 - (20%)
Similarity:126/384 - (32%) Gaps:147/384 - (38%)


- Green bases have known domain annotations that are detailed below.


  Fly   713 SGNP-----WECNCKAKAFLSFLRRHEPM-------EYETVLRRVEITDDKCPEDCICCVDTS-N 764
            :|||     |..|  ||.|    |:.:.|       ::.|::....:..||  .:..|.|:.. .
Zfish   205 AGNPKPKMRWLKN--AKPF----RQEDRMGGYKVRLQHWTLIMESVVPSDK--GNYTCLVENQYG 261

  Fly   765 SDSLAYVVDCSGKELSEIPQLPTPTYGQTTLVFERNSLKKWPSSLLPGYSSV-----TRF----- 819
            |.:..|.:|                      |.||:..:....:.||...:|     .:|     
Zfish   262 SINHTYTLD----------------------VVERSPHRPILQAGLPANVTVQVGQDAKFVCKVY 304

  Fly   820 --------YLAHNRLSDIDQLPDKLEYLDISNNNFSALDDRVRGFLQKRMNSSQLQLSLFGN--- 873
                    :|.|...:.....||.|.|              ||......:|||.:::.:..|   
Zfish   305 SDAQPHIQWLQHYTKNGSRYGPDGLPY--------------VRVLKSSGINSSDVEVLMLTNVTE 355

  Fly   874 ----PWTCRCEDKDFLVFVKEQAKNIANASAIQCIDTGRSLIEVE----ETDICPSVLIYYTSLA 930
                ..||:..:     ::.|     ||.|....:      |..|    |||..|.    |..:|
Zfish   356 EDAGEITCKVSN-----YIGE-----ANNSCWLIV------IPAETNPIETDYPPD----YVEIA 400

  Fly   931 V----SLLIIALSINVFIC-----------FRQPIMIWFYEHEICLSLAARRELDEDK------- 973
            :    ..||..:.:.|.:|           ..||.:     |::...:..||::..|.       
Zfish   401 IYCIGVFLIACMVVIVVVCRMRTSAKKPDFSSQPAV-----HKLTKQIPLRRQVSSDSSSSMSSS 460

  Fly   974 ----KYDAFLSFTHKDEDLIEEFVDRLENGRHKFRLCFYLRDWL-VGESIPD-CINQSV 1026
                :.....|..|  :|.|.|: |..|:.|.:|.     ||.| :|:.:.: |..|.|
Zfish   461 TPLVRITTRRSSAH--DDPIPEY-DLPEDPRWEFS-----RDKLTLGKPLGEGCFGQVV 511

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Toll-4NP_523519.2 leucine-rich repeat 264..287 CDD:275380
leucine-rich repeat 288..308 CDD:275380
leucine-rich repeat 309..334 CDD:275380
leucine-rich repeat 335..386 CDD:275380
leucine-rich repeat 388..408 CDD:275380
LRR_8 412..465 CDD:290566
leucine-rich repeat 412..432 CDD:275378
LRR_4 432..470 CDD:289563
leucine-rich repeat 433..454 CDD:275378
leucine-rich repeat 455..478 CDD:275378
leucine-rich repeat 479..490 CDD:275378
leucine-rich repeat 632..657 CDD:275378
leucine-rich repeat 658..679 CDD:275378
leucine-rich repeat 680..706 CDD:275378
leucine-rich repeat 707..719 CDD:275378 4/10 (40%)
leucine-rich repeat 771..791 CDD:275380 1/19 (5%)
leucine-rich repeat 793..815 CDD:275378 5/21 (24%)
leucine-rich repeat 816..835 CDD:275378 5/36 (14%)
leucine-rich repeat 836..859 CDD:275378 4/22 (18%)
TIR 974..1110 CDD:214587 16/55 (29%)
fgfr2XP_005169609.1 Ig 71..148 CDD:299845
IG_like 75..148 CDD:214653
Ig2_FGFR 187..271 CDD:143265 18/95 (19%)
IG_like 197..271 CDD:214653 18/95 (19%)
IG_like 286..380 CDD:214653 21/117 (18%)
Ig 294..381 CDD:299845 19/116 (16%)
PTKc_FGFR2 471..783 CDD:270679 16/49 (33%)
Pkinase_Tyr 496..772 CDD:285015 5/16 (31%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.910

Return to query results.
Submit another query.