DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Toll-4 and Tlr10

DIOPT Version :9

Sequence 1:NP_523519.2 Gene:Toll-4 / 34235 FlyBaseID:FBgn0032095 Length:1125 Species:Drosophila melanogaster
Sequence 2:NP_001139507.1 Gene:Tlr10 / 305355 RGDID:1311569 Length:811 Species:Rattus norvegicus


Alignment Length:1022 Identity:212/1022 - (20%)
Similarity:359/1022 - (35%) Gaps:356/1022 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly   218 TVNSVI--TNNYIRKTMNNTEKIKIYYHNTFEK---------TTLTMEKNI--------FHGKNK 263
            |:.::|  |..:..:..:..|.|..|.:....|         |.|.:..|:        ||..:|
  Rat     9 TLYNIIMSTEAWAPRPTDERELISNYSNMALRKVPPDVTPATTILDLSYNLLYQFQSSDFHSFSK 73

  Fly   264 MSALIFNGLKIKGLTNNTFENLTSLNTLIFDNVFLKDLSFLRSS--TLQSSLTYCIMKVDNMVDL 326
            :..||        |.:|:.:   .|:|.|||  ..|:||:|..|  .|| |:|:     .::|||
  Rat    74 LRFLI--------LCHNSIQ---QLDTKIFD--LNKELSYLDLSYNRLQ-SITW-----SSLVDL 119

  Fly   327 K----SFEKFTNL----EI---------------IEVSQYKGFKNF---TAFICEPYKSHCKFTL 365
            :    ||..|..|    ||               |:.|..:...|.   |.||            
  Rat   120 RHLDLSFNDFDTLPACEEIGNMRHLETLGLSGAKIQRSDLQKIANLQFSTVFI------------ 172

  Fly   366 GINEVACPLKCNCSYNRDKSQLEIDCWQKNLTTIPSLPVPKKG-----------SSALVFQSNLL 419
            |:|.:        |:..:.|...::      ||:..:.:|...           :|.:|..||: 
  Rat   173 GLNTL--------SHYEEGSLPVLN------TTVLHIVLPMAANFWVLLCDGMKTSKVVEMSNI- 222

  Fly   420 AELPDNSLEGYHNLKSLDVSYNQLTSLSVSQLPESLHYLDIRHNKITTLSPQVVEYLYSVNVFNQ 484
                        ..||..|||            |:...|.:.:.|.:||            :|::
  Rat   223 ------------GGKSQFVSY------------ETPRTLSVENTKASTL------------IFHK 251

  Fly   485 YGNKWSIYCDEYHLQEFFWYKAKLLRIKTSKFQTIMEYIELSSKGSFVENFFVQNIDQLYLEANE 549
            ....|.   |..|:.:|.|        :||                 ||.|.:|::....: |:.
  Rat   252 VDLLWD---DLLHVFQFVW--------QTS-----------------VECFQIQDLTFGGM-ASR 287

  Fly   550 DEIIDAFGPSDKYFNLKLMEALN--------HAIWLFSGEFDEIILHHLNSPCPYRCSCCFEWHT 606
            |.  .:|..|:......::|:::        :.|:||   |.::.|.:|...........|..|.
  Rat   288 DH--SSFDYSNTVMKAVILESIHFRIFFIPQNKIYLF---FTQMDLENLTISDAQMPHLLFPSHP 347

  Fly   607 GEF--LINCRNLSLDIYPRLPNSIPYKTTLYLDRNEIRKLTNTESLV--VAGHASIHKLHMSQNL 667
            ..|  |....|:..|...:.|..:||..||.|..|::..|    |||  .|.|.|:..|.:||||
  Rat   348 QSFQHLNFANNILTDDLFKNPIQMPYLKTLVLRGNQLETL----SLVSLFANHTSLLHLDLSQNL 408

  Fly   668 LRELPLHLLPENITYLDVRNNLLKYLDDGVIAFLEYRENITKIELSGNPWECNCKAKAFLSFLRR 732
            |:.                                           ||                 
  Rat   409 LQH-------------------------------------------GN----------------- 413

  Fly   733 HEPMEYETVLRRVEITDDKCP-EDCICCVDTSNSDSLAYVVDCSGKELSEIPQLPTPTYGQTTLV 796
                            .:||. .|.:..::.|::.....|..|..|.:.             ||.
  Rat   414 ----------------GEKCMWPDTLILLNLSSNKFDGSVFRCLPKSIQ-------------TLD 449

  Fly   797 FERNSLKKWPSSLLPGY-SSVTRFYLAHNRLSDIDQLP-----DKLEYLDISNNNF--SALDDRV 853
            ...|.::..|..::  | .|:....:|.|.|:|   ||     .:|..|:|..|..  .:||   
  Rat   450 LNNNKIRAVPKEII--YLKSLRELSIAFNFLTD---LPGCDHFKRLSSLNIEMNLILSPSLD--- 506

  Fly   854 RGFLQ-----KRMNSSQLQLSLFGNPWTCRCEDKDFLVFVKEQAKNIAN------ASAIQCIDTG 907
              |.|     |.:|:.:       ||:.|.||.:|| :::::.:|.:.:      |........|
  Rat   507 --FFQSCQEVKTLNAGR-------NPFRCICEFRDF-IWLEKHSKGLMSEWPDSYACEYPLSLKG 561

  Fly   908 RSLIEVEETDI-CPSVLIYYTSLAVSLLIIALSINVFICFRQPIMIWFY---------EHEICLS 962
            ..|.:|...:: |.:.|:..|   :.|:|:.|.:.|..|..:..|:|:.         :|.:   
  Rat   562 TPLKDVYLPELACNTTLLIVT---IVLVILVLGLVVAFCILKFDMLWYLRVLAQCIRTQHRV--- 620

  Fly   963 LAARRELDEDKK----YDAFLSFTHKDEDLIE-EFVDRLENGRHKFRLCFYLR----DWLVGESI 1018
               |:.:.|::|    :.||:|:...|...:: |.:..||.......||...|    |..:.|:|
  Rat   621 ---RKTVREERKRSVQFHAFISYAAHDSVWVKNELIPNLETEDGSVLLCLPERNFDPDRSIAENI 682

  Fly  1019 PDCINQSVKGSRRIIILMTKNFLKSTWGRLEFRLALHATSRDRCKRLIVVLYPDVEHF--DDLDS 1081
            ..|..:|.|.    |.:::.||:::.|...|..||.|...||....:|.:|...:..:  .....
  Rat   683 ISCTEKSYKS----IFVLSPNFVQNGWCHNELYLAHHNPFRDNYDYIIPILLEPIPSYCVPTKFP 743

  Fly  1082 ELRAYMVLNTYLD-----RNNPNFWNKLMYSMPHASHLKRSRSDAET 1123
            :|:|.:....||:     |.:..||..|..::.......|.|.:.:|
  Rat   744 KLKALLEKKVYLEWPKDRRKHGLFWANLRAAINVNLSDTRGRCELQT 790

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Toll-4NP_523519.2 leucine-rich repeat 264..287 CDD:275380 4/22 (18%)
leucine-rich repeat 288..308 CDD:275380 10/21 (48%)
leucine-rich repeat 309..334 CDD:275380 10/28 (36%)
leucine-rich repeat 335..386 CDD:275380 12/72 (17%)
leucine-rich repeat 388..408 CDD:275380 3/19 (16%)
LRR_8 412..465 CDD:290566 10/52 (19%)
leucine-rich repeat 412..432 CDD:275378 3/19 (16%)
LRR_4 432..470 CDD:289563 10/37 (27%)
leucine-rich repeat 433..454 CDD:275378 5/20 (25%)
leucine-rich repeat 455..478 CDD:275378 4/22 (18%)
leucine-rich repeat 479..490 CDD:275378 1/10 (10%)
leucine-rich repeat 632..657 CDD:275378 10/26 (38%)
leucine-rich repeat 658..679 CDD:275378 6/20 (30%)
leucine-rich repeat 680..706 CDD:275378 0/25 (0%)
leucine-rich repeat 707..719 CDD:275378 2/11 (18%)
leucine-rich repeat 771..791 CDD:275380 3/19 (16%)
leucine-rich repeat 793..815 CDD:275378 5/22 (23%)
leucine-rich repeat 816..835 CDD:275378 6/23 (26%)
leucine-rich repeat 836..859 CDD:275378 8/29 (28%)
TIR 974..1110 CDD:214587 37/151 (25%)
Tlr10NP_001139507.1 LRR_RI <39..167 CDD:238064 37/146 (25%)
leucine-rich repeat 50..73 CDD:275378 5/22 (23%)
LRR_8 72..129 CDD:290566 24/75 (32%)
leucine-rich repeat 74..97 CDD:275378 9/35 (26%)
leucine-rich repeat 98..118 CDD:275378 8/25 (32%)
leucine-rich repeat 119..143 CDD:275378 7/23 (30%)
leucine-rich repeat 144..155 CDD:275378 0/10 (0%)
LRR_RI <324..481 CDD:238064 47/254 (19%)
leucine-rich repeat 350..373 CDD:275380 5/22 (23%)
LRR_8 372..455 CDD:290566 31/175 (18%)
leucine-rich repeat 374..398 CDD:275380 10/27 (37%)
leucine-rich repeat 399..422 CDD:275380 10/98 (10%)
leucine-rich repeat 423..444 CDD:275380 3/20 (15%)
LRR_8 443..500 CDD:290566 17/74 (23%)
leucine-rich repeat 445..467 CDD:275380 5/36 (14%)
leucine-rich repeat 468..489 CDD:275380 6/23 (26%)
leucine-rich repeat 490..513 CDD:275380 8/27 (30%)
TPKR_C2 522..574 CDD:301599 12/52 (23%)
TIR 633..775 CDD:214587 36/145 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D147327at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.010

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