DRSC/TRiP Functional Genomics Resources

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Protein Alignment Toll-4 and Tlr1

DIOPT Version :9

Sequence 1:NP_523519.2 Gene:Toll-4 / 34235 FlyBaseID:FBgn0032095 Length:1125 Species:Drosophila melanogaster
Sequence 2:NP_001263374.1 Gene:Tlr1 / 21897 MGIID:1341295 Length:795 Species:Mus musculus


Alignment Length:903 Identity:181/903 - (20%)
Similarity:321/903 - (35%) Gaps:287/903 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly   360 HCKFTLGINEVACPLKCNCSYNRDKSQLEIDCWQKNLTTIP-SLPVPKKGSSALVFQSNLLAELP 423
            :|...||:..:...|...|       :|.|.....|||.:| .||:.   ::.|....|.::||.
Mouse    10 YCIIVLGLTLMKIQLSEEC-------ELIIKRPNANLTRVPKDLPLQ---TTTLDLSQNNISELQ 64

  Fly   424 DNSLEGYHNLKSLDVSYNQLTSLSVS--QLPESLHYLDIRHN--KITTLSPQV-VEYL-YSVNVF 482
            .:.:.....|:.|.:|||:|..|::|  :....|.|||:.||  |:....|.| :::| .|.|.|
Mouse    65 TSDILSLSKLRVLIMSYNRLQYLNISVFKFNTELEYLDLSHNELKVILCHPTVSLKHLDLSFNAF 129

  Fly   483 N------QYGNKWSIYCDEYHLQEFFWYKAKLLRIKTSKFQTIMEYIELSSKGSFVENFFVQNID 541
            :      ::||                             .:.::::.||  ||.|::..||.|.
Mouse   130 DALPICKEFGN-----------------------------MSQLQFLGLS--GSRVQSSSVQLIA 163

  Fly   542 QLYLEANEDEII----DAFGPSDKYFNLKLM--EALNHAIWLFSGEFDEII---------LHHLN 591
            .|    |..:::    ||:|..:...:|:.:  |.| |.::....||..::         |...|
Mouse   164 HL----NISKVLLVLGDAYGEKEDPESLRHVSTETL-HIVFPSKREFRFLLDVSVSTTIGLELSN 223

  Fly   592 SPCPYRCSCC------------------------------------FEWHTGEFLINCRNLSLDI 620
            ..|......|                                    ..|||.....:..|:    
Mouse   224 IKCVLEDQGCSYFLRALSKLGKNLKLSNLTLNNVETTWNSFINILQIVWHTPVKYFSISNV---- 284

  Fly   621 YPRLPNSIPYKTTLYLDRNEIRKLT-----------------------NTESLVVAGHASIHKLH 662
              :|...:.::...|.| ..::.|:                       |.::..::|...:|.|.
Mouse   285 --KLQGQLAFRMFNYSD-TSLKALSIHQVVTDVFSFPQSYIYSIFANMNIQNFTMSGTHMVHMLC 346

  Fly   663 MSQ-----------------------NLLRELPLHLLP------ENITY----------LDVRNN 688
            .||                       ||:|...|.|..      |||..          ||:..|
Mouse   347 PSQVSPFLHVDFTDNLLTDMVFKDCRNLVRLKTLSLQKNQLKNLENIILTSAKMTSLQKLDISQN 411

  Fly   689 LLKYLDDGVIAFLEYRENITKIELSGNPWECNCKAKAFLSFLRRHEPMEYETVLRRVEITDDKCP 753
            .|:|.|.|:..  .:.:::..:.||.|                    |...:|.|          
Mouse   412 SLRYSDGGIPC--AWTQSLLVLNLSSN--------------------MLTGSVFR---------- 444

  Fly   754 EDCICCVDTSNSDSLAYVVDCSGKELSEIPQLPTPTYGQTTLVFERNSLKKWPSSLLPG---YSS 815
                 |:...     ..|:|.....:..||:..|.......|....|||..     |||   :||
Mouse   445 -----CLPPK-----VKVLDLHNNRIMSIPKDVTHLQALQELNVASNSLTD-----LPGCGAFSS 494

  Fly   816 VTRFYLAHNRLSDIDQLPDKLEYLDISNNNFSALDDRVRGFLQKRMNSSQLQLSLFGNPWTCRCE 880
            ::...:.||.:|...:                       .|.|...|...|...  .||:.|.||
Mouse   495 LSVLVIDHNSVSHPSE-----------------------DFFQSCQNIRSLTAG--NNPFQCTCE 534

  Fly   881 DKDFLVFVKEQAKNIANA--SAIQC----IDTGRSLIEVEETDI-CPSVLIYYTSLAVSLLIIAL 938
            .:||:..:...|:.:...  .:.:|    ...|.:|.:...:.: |.:||:..| :..::|::|:
Mouse   535 LRDFVKNIGWVAREVVEGWPDSYRCDYPESSRGTALRDFHMSPLSCDTVLLTVT-IGATMLVLAV 598

  Fly   939 SINVFIC--FRQPIMIWFYEHEICLSLAAR--------RELDEDKKYDAFLSFTHKDEDLIE-EF 992
            : ..|:|  |..|   | |...:|.....|        .||..:.::.||:|::..|...:: |.
Mouse   599 T-GAFLCLYFDLP---W-YVRMLCQWTQTRHRARHIPLEELQRNLQFHAFVSYSGHDSAWVKNEL 658

  Fly   993 VDRLENGRHKFRLCFYLRDWLVGESIPDCINQSVKGSRRIIILMTKNFLKSTWGRLEFRLALHAT 1057
            :..||  :...::|.:.|:::.|:||.:.|...::.|.:.|.:::.:|::|.|...|...|.|..
Mouse   659 LPNLE--KDDIQICLHERNFVPGKSIVENIINFIEKSYKSIFVLSPHFIQSEWCHYELYFAHHNL 721

  Fly  1058 SRDRCKRLIVVLYPDVEHFDDLDS--ELRAYMVLNTYL----DRNNPN-FWNKLMYSM 1108
            ..:....||::|...:..:....:  :|:..|...|||    ::|... ||..|..|:
Mouse   722 FHEGSDNLILILLAPIPQYSIPTNYHKLKTLMSRRTYLEWPTEKNKHGLFWANLRASI 779

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Toll-4NP_523519.2 leucine-rich repeat 264..287 CDD:275380
leucine-rich repeat 288..308 CDD:275380
leucine-rich repeat 309..334 CDD:275380
leucine-rich repeat 335..386 CDD:275380 5/25 (20%)
leucine-rich repeat 388..408 CDD:275380 7/20 (35%)
LRR_8 412..465 CDD:290566 18/56 (32%)
leucine-rich repeat 412..432 CDD:275378 4/19 (21%)
LRR_4 432..470 CDD:289563 15/41 (37%)
leucine-rich repeat 433..454 CDD:275378 8/22 (36%)
leucine-rich repeat 455..478 CDD:275378 10/26 (38%)
leucine-rich repeat 479..490 CDD:275378 4/16 (25%)
leucine-rich repeat 632..657 CDD:275378 5/47 (11%)
leucine-rich repeat 658..679 CDD:275378 9/49 (18%)
leucine-rich repeat 680..706 CDD:275378 8/35 (23%)
leucine-rich repeat 707..719 CDD:275378 3/11 (27%)
leucine-rich repeat 771..791 CDD:275380 5/19 (26%)
leucine-rich repeat 793..815 CDD:275378 7/24 (29%)
leucine-rich repeat 816..835 CDD:275378 3/18 (17%)
leucine-rich repeat 836..859 CDD:275378 1/22 (5%)
TIR 974..1110 CDD:214587 34/143 (24%)
Tlr1NP_001263374.1 PRK15370 <38..>133 CDD:185268 31/97 (32%)
LRR <48..317 CDD:227223 58/314 (18%)
leucine-rich repeat 50..73 CDD:275378 4/22 (18%)
LRR 1 54..77 4/22 (18%)
leucine-rich repeat 74..97 CDD:275378 8/22 (36%)
LRR 2 78..101 7/22 (32%)
leucine-rich repeat 98..118 CDD:275378 8/19 (42%)
LRR 3 102..125 7/22 (32%)
leucine-rich repeat 119..143 CDD:275378 6/52 (12%)
LRR 4 126..150 4/52 (8%)
leucine-rich repeat 144..156 CDD:275378 5/13 (38%)
LRR 5 151..175 8/27 (30%)
LRR 6 176..199 7/23 (30%)
LRR 7 200..223 3/22 (14%)
LRR 8 224..250 2/25 (8%)
LRR 9 251..278 3/26 (12%)
LRR 10 279..308 5/35 (14%)
LRR 11 309..337 1/27 (4%)
Interaction with bacterial lipopeptide. /evidence=ECO:0000250 316..319 0/2 (0%)
LRR 12 338..361 5/22 (23%)
leucine-rich repeat 355..376 CDD:275380 2/20 (10%)
LRR 13 362..388 5/25 (20%)
PRK15370 <377..>487 CDD:185268 28/156 (18%)
leucine-rich repeat 377..402 CDD:275380 5/24 (21%)
LRR 14 389..414 6/24 (25%)
leucine-rich repeat 403..427 CDD:275380 7/25 (28%)
LRR 15 415..437 6/43 (14%)
leucine-rich repeat 428..449 CDD:275380 7/55 (13%)
LRR 16 438..457 5/38 (13%)
leucine-rich repeat 450..472 CDD:275380 5/21 (24%)
LRR 17 458..478 4/19 (21%)
leucine-rich repeat 473..494 CDD:275380 7/25 (28%)
LRR 18 479..500 8/25 (32%)
leucine-rich repeat 495..518 CDD:275380 5/45 (11%)
LRR 19 501..524 7/45 (16%)
LRRCT 527..581 CDD:214507 11/53 (21%)
TIR 639..782 CDD:214587 34/143 (24%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG4641
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D147327at33208
OrthoFinder 1 1.000 - - FOG0000239
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR24365
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X221
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
65.920

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