DRSC/TRiP Functional Genomics Resources

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Protein Alignment Toll-4 and cd180

DIOPT Version :9

Sequence 1:NP_523519.2 Gene:Toll-4 / 34235 FlyBaseID:FBgn0032095 Length:1125 Species:Drosophila melanogaster
Sequence 2:NP_001297419.1 Gene:cd180 / 101885327 ZFINID:ZDB-GENE-070705-323 Length:665 Species:Danio rerio


Alignment Length:679 Identity:145/679 - (21%)
Similarity:244/679 - (35%) Gaps:183/679 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly   390 DCWQKNLTTIPSLPVPKKGSSALVFQSNLLAELPDNSLEGYHNLKSLDVSYNQLT---------- 444
            ||...:|.:||. .:| .....|.|..|.|..|.:::.:...:|:||||:...:|          
Zfish    40 DCNDMDLQSIPD-EIP-NSVQILQFSFNYLPALYNSTFQRLKSLRSLDVTRCSITFIYEDVFTYQ 102

  Fly   445 -SLSVSQL---------------PESLHYLDIRHNKITTLSPQVVEYLYSVNVFNQYG-NKWSIY 492
             .|.|..|               |.:|.||.:..:||..||....|.|..:.|.:..| |..|: 
Zfish   103 PHLEVLLLTGNPLVFIASTAFSGPLALKYLSLVQSKIKQLSDIPSENLAYLEVLDLRGSNIRSL- 166

  Fly   493 CDEYHLQEFFWYKAKLLRIKTS-----KFQTIMEY-----IELSSKGS---FVE--NFFVQNIDQ 542
               ..|..|.|...|.|::..:     .|..:..:     :.:|.||:   ::|  .|...|:..
Zfish   167 ---NGLSNFRWQNLKSLQLDLNFIDRISFNDLQPFSNLAGVSISFKGNDFIYIEPGAFHSLNLSS 228

  Fly   543 LYL-----EANEDEIIDAF-GPSDKYFNLKLME----------ALNHAIWLFSGEFDEIILHHL- 590
            |..     :.|...::... |......||.|.|          ||.....:|..:.|..:.|.| 
Zfish   229 LDFSGCLNKMNISSLLKGLEGIKTNRLNLGLYETDSNVYIASAALQSFCNIFVSDLDFQLQHFLD 293

  Fly   591 --NSPCPYRCSCCFEWHTGEFLINCRNLSLDIYPRLPNSIPYKTT-------LYLDRNEIRKL-- 644
              ||          .:|..|.|     ..||:.....|::|..||       |.||.|:.:.:  
Zfish   294 LNNS----------TFHCLEGL-----KKLDLTRAHLNALPLNTTGLSTLSHLILDENQFKDVCQ 343

  Fly   645 TNTESLVVAGHASI----HKLHMSQ------NLLRELPLHLLPENITYLDVR----NNLLKYLDD 695
            :||.:..:..|.||    .||..|.      .||.||.|     :::.::.|    ||.|..|.:
Zfish   344 SNTRNFPMLTHLSISGNLKKLTFSNRCLDSLGLLEELDL-----SVSLVNPREPCCNNQLFGLGE 403

  Fly   696 GVIAFLEYRENITKIELSGNP--WECNCKAKAFLSFLRRHEPMEYE----TVLRRVEITDDKCPE 754
            ..:..|.|          |:|  |    .:|.| :...:.|.:::.    |:|      :|..|.
Zfish   404 LKLLNLSY----------GSPMFW----SSKPF-NVTPKLEHLDFSHSVYTLL------NDSSPF 447

  Fly   755 DCICCVDT-----SNSDSLAYVVDCSGKELSEIPQLPTPTYGQT--------------TLVFERN 800
            ..:..:.|     ||:|.....:....|.|..:........|:.              |||....
Zfish   448 SNLQSLRTLNLSWSNTDLTNVHLFVGLKALQHLNLRGNAIQGEVLTQTELFKCVPLLETLVLSAC 512

  Fly   801 SLKKWPSSLLPGYSSVTRFYLAHNRLSDIDQLPDKLEYLDISNNNFSALDDRVRGFLQKRMNSSQ 865
            .:..:..:|..|...:....|:.|:            ::.:|.:.|.:||.....|.:..:.:..
Zfish   513 KITSFDENLFKGLRHLNHIDLSENK------------FVKLSTSGFYSLDFLKLNFARNDITTVD 565

  Fly   866 L----------QLSLFGNPWTCRCEDKDFLVFVKEQAKNIANASAIQCIDTGRSLIEVE-ETDIC 919
            :          .:.|..||..|.|.:.:|:.:||:....:.:.....|..||..:|:.: :.|:.
Zfish   566 VASVADLGEEGSVDLSYNPLVCNCSNFEFIHWVKKNKVKVKHLMETFCNGTGTRIIDAKLQCDLP 630

  Fly   920 PSVLIYYTSLAVSLLIIALSINVFICFRQ 948
            ..||::...||..||..|    :|:..|:
Zfish   631 VGVLVFCAVLAAVLLASA----IFLLIRR 655

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Toll-4NP_523519.2 leucine-rich repeat 264..287 CDD:275380
leucine-rich repeat 288..308 CDD:275380
leucine-rich repeat 309..334 CDD:275380
leucine-rich repeat 335..386 CDD:275380
leucine-rich repeat 388..408 CDD:275380 6/17 (35%)
LRR_8 412..465 CDD:290566 18/78 (23%)
leucine-rich repeat 412..432 CDD:275378 5/19 (26%)
LRR_4 432..470 CDD:289563 16/63 (25%)
leucine-rich repeat 433..454 CDD:275378 10/46 (22%)
leucine-rich repeat 455..478 CDD:275378 9/22 (41%)
leucine-rich repeat 479..490 CDD:275378 3/11 (27%)
leucine-rich repeat 632..657 CDD:275378 9/33 (27%)
leucine-rich repeat 658..679 CDD:275378 9/30 (30%)
leucine-rich repeat 680..706 CDD:275378 7/29 (24%)
leucine-rich repeat 707..719 CDD:275378 3/13 (23%)
leucine-rich repeat 771..791 CDD:275380 2/19 (11%)
leucine-rich repeat 793..815 CDD:275378 5/35 (14%)
leucine-rich repeat 816..835 CDD:275378 2/18 (11%)
leucine-rich repeat 836..859 CDD:275378 5/22 (23%)
TIR 974..1110 CDD:214587
cd180NP_001297419.1 leucine-rich repeat 40..56 CDD:275380 6/17 (35%)
LRR_8 56..115 CDD:316378 14/58 (24%)
leucine-rich repeat 57..80 CDD:275380 5/22 (23%)
leucine-rich repeat 81..104 CDD:275380 6/22 (27%)
LRR_8 103..163 CDD:316378 15/59 (25%)
leucine-rich repeat 105..128 CDD:275380 4/22 (18%)
leucine-rich repeat 153..176 CDD:275380 7/26 (27%)
leucine-rich repeat 177..200 CDD:275380 3/22 (14%)
leucine-rich repeat 201..225 CDD:275380 5/23 (22%)
leucine-rich repeat 226..247 CDD:275380 2/20 (10%)
leucine-rich repeat 284..304 CDD:275378 6/29 (21%)
leucine-rich repeat 305..327 CDD:275380 7/26 (27%)
leucine-rich repeat 328..351 CDD:275380 6/22 (27%)
leucine-rich repeat 352..376 CDD:275380 6/23 (26%)
leucine-rich repeat 404..427 CDD:275380 7/37 (19%)
LRR_8 426..487 CDD:316378 11/66 (17%)
leucine-rich repeat 428..452 CDD:275380 5/29 (17%)
leucine-rich repeat 453..476 CDD:275380 4/22 (18%)
leucine-rich repeat 477..503 CDD:275380 2/25 (8%)
LRR_8 502..561 CDD:316378 12/70 (17%)
leucine-rich repeat 504..527 CDD:275380 5/22 (23%)
leucine-rich repeat 528..549 CDD:275380 4/32 (13%)
leucine-rich repeat 552..574 CDD:275380 1/21 (5%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG4641
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D147327at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.910

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