DRSC/TRiP Functional Genomics Resources

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Protein Alignment DIP-zeta and negr1

DIOPT Version :9

Sequence 1:NP_723441.2 Gene:DIP-zeta / 34231 FlyBaseID:FBgn0051708 Length:532 Species:Drosophila melanogaster
Sequence 2:XP_009300786.1 Gene:negr1 / 445374 ZFINID:ZDB-GENE-040822-27 Length:360 Species:Danio rerio


Alignment Length:335 Identity:102/335 - (30%)
Similarity:150/335 - (44%) Gaps:51/335 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly   114 EFTEYIENVTVPAGRNVKLGCSVKNLGSYKVAWMHFEQSAILTVHNHVITRNPRISVTHDKHDRH 178
            ::|...|:|....|....|.|.:.: |..|.||::  :|:|:...|...:.:||:|:..:..|:|
Zfish    39 DYTTSSESVVSRQGDTALLRCYLLD-GISKGAWLN--RSSIIYAGNDKWSGDPRVSIVSNVGDKH 100

  Fly   179 RTWYLHINNVHEEDRGRYMCQINTV-TAKTQFGYLNVVVPPNIDDSLSSSDVIVREGANISLRCR 242
            . :.|.|..|...|.|.|.|.|.:. ....:...|.|.|||.|.|  .|||:.|.||:|:||.|.
Zfish   101 E-YSLQIQKVDVTDEGVYTCSIQSERNLHPKLIQLIVKVPPKIYD--ISSDITVNEGSNVSLICA 162

  Fly   243 ASGSPRPIIKWKRDDNSRIAINKNHI---VNEWE-GDTLEITRISRLDMGAYLCIASNGVPPTVS 303
            |||.|.|.|.|:            ||   ..::| |:.|.||.|||...|.|.|.|.|.:....:
Zfish   163 ASGKPEPKISWR------------HISPSARKYESGEYLNITGISRDQAGDYECGAENDIASPDT 215

  Fly   304 KRIKVSVDFPPMLLIPHQLV--GAPEGFNVTIECFTEAHPTSLNYWTRGE-------GPIIHDSH 359
            |.::|:|:|||.:   |::.  |...|....:.|...|.|:.:..|.:||       |.:|::..
Zfish   216 KTVRVTVNFPPAI---HEMKSHGVRPGQVALLRCEAAAVPSPVFEWYKGEKRINMGQGIVINNLS 277

  Fly   360 KYKVEATVGLPAYKTHMKLTIINVSSGDDGIYKCVAKNPRGETDGIIRLYVSYPPTTAS--SGIY 422
            ...|              ||:.|::....|.|.|||.|..|..:..:.|.....|||.|  |...
Zfish   278 SRSV--------------LTVKNMTQDRYGNYTCVAVNRLGTANASVPLNPIIEPTTTSAVSSPA 328

  Fly   423 STDTHWGENG 432
            |....:|..|
Zfish   329 SNPAMYGSTG 338

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
DIP-zetaNP_723441.2 IG_like 120..216 CDD:214653 27/96 (28%)
Ig 130..200 CDD:143165 21/69 (30%)
I-set 226..310 CDD:254352 34/87 (39%)
IGc2 233..298 CDD:197706 28/68 (41%)
Ig 313..410 CDD:299845 25/105 (24%)
IG_like 325..410 CDD:214653 21/91 (23%)
negr1XP_009300786.1 Ig 42..121 CDD:299845 24/82 (29%)
IG_like 44..136 CDD:214653 26/95 (27%)
I-set 140..222 CDD:254352 37/95 (39%)
IGc2 153..208 CDD:197706 27/66 (41%)
IG_like 236..312 CDD:214653 20/89 (22%)
IGc2 238..304 CDD:197706 19/79 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170576312
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3510
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D265311at33208
OrthoFinder 1 1.000 - - FOG0000150
OrthoInspector 1 1.000 - - otm26286
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R6406
SonicParanoid 1 1.000 - - X97
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
98.780

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