DRSC/TRiP Functional Genomics Resources

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Protein Alignment DIP-zeta and Cadm4

DIOPT Version :10

Sequence 1:NP_723441.2 Gene:DIP-zeta / 34231 FlyBaseID:FBgn0051708 Length:532 Species:Drosophila melanogaster
Sequence 2:NP_694752.1 Gene:Cadm4 / 260299 MGIID:2449088 Length:388 Species:Mus musculus


Alignment Length:368 Identity:84/368 - (22%)
Similarity:125/368 - (33%) Gaps:106/368 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly    78 AGSGTGSTVVGSNGVIVAGGGANVPTSNLNIVVEEPEFTEYIENVTVPAGRNVKLGCSVKNLGSY 142
            ||.|||..|                               ..|||||..|...::.|.       
Mouse    19 AGPGTGQEV-------------------------------QTENVTVAEGGVAEITCR------- 45

  Fly   143 KVAWMHFEQSAILTVHNHV----------ITRNPRISVTHDKHDRHRTWYLHINNVHEEDRGRYM 197
                :|....:|:.:.|..          ..::.|..:......|.|   :.:::...||.|.|.
Mouse    46 ----LHQYDGSIVVIQNPARQTLFFNGTRALKDERFQLEEFSPRRVR---IRLSDARLEDEGGYF 103

  Fly   198 CQINTVTAKTQFGYLNVVVPPNIDDSLSSSDVIVR----EGANISLRCRASGS-PRPIIKWKRD- 256
            ||:.|.....|...|.|:|.|      .:..|.||    ||..:.|.|....| |..:::|.|| 
Mouse   104 CQLYTEDTHHQIATLTVLVAP------ENPVVEVREQAVEGGEVELSCLVPRSRPAAVLRWYRDR 162

  Fly   257 ----------DNSRIAINKNHIVNEWEGDTLEITRISRLDMGA-YLCIASN-GVPPTVSKRIK-- 307
                      :|.::          |...:....|:.|.|.|. .:|.|.| .:|...||:.:  
Mouse   163 KELKGVSSGQENGKV----------WSVASTVRFRVDRKDDGGIVICEAQNQALPSGHSKQTQYV 217

  Fly   308 VSVDFPPMLLIPHQLVGAPEGFNVTIECFTEAHPTSLNY-WTRGEGPIIHDSHKYKVEATVGLPA 371
            :.|.:.|...|........||..:.:.|....:|..... |.||     ::|...:.|| ||   
Mouse   218 LDVQYSPTARIHASQAVVREGDTLVLTCAVTGNPRPNQIRWNRG-----NESLPERAEA-VG--- 273

  Fly   372 YKTHMKLTIINVSSGDDGIYKCVAKNPRGETDGIIRLYVSYPP 414
                ..||:..:.|.|:|.|.|.|.|..|....:..|.| |.|
Mouse   274 ----ETLTLPGLVSADNGTYTCEAANKHGHARALYVLVV-YDP 311

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
DIP-zetaNP_723441.2 IG_like 120..216 CDD:214653 23/105 (22%)
Ig strand B 130..134 CDD:409405 0/3 (0%)
Ig strand C 143..147 CDD:409405 0/3 (0%)
Ig strand E 178..185 CDD:409405 1/6 (17%)
IgI_1_MuSK 218..310 CDD:409562 25/111 (23%)
Ig strand A 218..221 CDD:409562 1/2 (50%)
Ig strand A' 226..231 CDD:409562 1/4 (25%)
Ig strand B 237..244 CDD:409562 2/6 (33%)
Ig strand C 250..255 CDD:409562 1/4 (25%)
Ig strand C' 257..259 CDD:409562 0/1 (0%)
Ig strand D 267..270 CDD:409562 0/2 (0%)
Ig strand E 275..281 CDD:409562 0/5 (0%)
Ig strand F 288..295 CDD:409562 2/7 (29%)
Ig strand G 302..310 CDD:409562 2/9 (22%)
IG_like 325..410 CDD:214653 23/85 (27%)
Ig strand B 331..335 CDD:143207 0/3 (0%)
Ig strand C 344..348 CDD:143207 0/4 (0%)
Ig strand E 376..380 CDD:143207 1/3 (33%)
Ig strand F 390..395 CDD:143207 2/4 (50%)
Ig strand G 403..406 CDD:143207 0/2 (0%)
Cadm4NP_694752.1 Ig 29..120 CDD:472250 22/104 (21%)
Ig strand B 40..44 CDD:409465 0/3 (0%)
Ig strand C 53..57 CDD:409465 1/3 (33%)
Ig strand E 87..91 CDD:409465 1/6 (17%)
Ig strand F 101..106 CDD:409465 2/4 (50%)
Ig strand G 113..116 CDD:409465 1/2 (50%)
IgI_2_Necl-4 121..220 CDD:409468 26/114 (23%)
Ig strand A 121..124 CDD:409468 1/2 (50%)
Ig strand A' 127..131 CDD:409468 1/3 (33%)
Ig strand B 139..149 CDD:409468 2/9 (22%)
Ig strand C 152..161 CDD:409468 2/8 (25%)
Ig strand C' 162..165 CDD:409468 0/2 (0%)
Ig strand D 167..174 CDD:409468 0/6 (0%)
Ig strand E 177..187 CDD:409468 1/19 (5%)
Ig strand F 195..203 CDD:409468 2/7 (29%)
Ig strand G 212..219 CDD:409468 1/6 (17%)
Ig_3 224..295 CDD:464046 22/83 (27%)
4.1m 344..362 CDD:128590
Blue background indicates that the domain is not in the aligned region.

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