DRSC/TRiP Functional Genomics Resources

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Protein Alignment DIP-zeta and Ncam1

DIOPT Version :9

Sequence 1:NP_723441.2 Gene:DIP-zeta / 34231 FlyBaseID:FBgn0051708 Length:532 Species:Drosophila melanogaster
Sequence 2:XP_006510118.1 Gene:Ncam1 / 17967 MGIID:97281 Length:1162 Species:Mus musculus


Alignment Length:423 Identity:100/423 - (23%)
Similarity:161/423 - (38%) Gaps:90/423 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly   100 NVPTSNLNIVVEEPEFTEYIENVTVPAGRNVKLGCSVKNLGSYKVAWMHFEQSAIL--TVHNHVI 162
            |.||..        ||.|         |.:..:.|.|.:.....:.|.|..:..||  .|...|:
Mouse   122 NAPTPQ--------EFKE---------GEDAVIVCDVVSSLPPTIIWKHKGRDVILKKDVRFIVL 169

  Fly   163 TRNPRISVTHDKHDRHRTWYLHINNVHEEDRGRYMCQINTVTAKTQFGYLNVVVPPNIDDSLSSS 227
            :.|                ||.|..:.:.|.|.|.|: ..:.|:.:..:.::.|..|:..::.:.
Mouse   170 SNN----------------YLQIRGIKKTDEGTYRCE-GRILARGEINFKDIQVIVNVPPTVQAR 217

  Fly   228 DVIVREGAN----ISLRCRASGSPRPIIKWKRD----DNSRIAINKNHIVNEWEGDTLEITRISR 284
            ..||...||    ::|.|.|.|.|.|.:.|.:|    :|.. ..::.||.:: :...|.|..:.:
Mouse   218 QSIVNATANLGQSVTLVCDADGFPEPTMSWTKDGEPIENEE-EDDEKHIFSD-DSSELTIRNVDK 280

  Fly   285 LDMGAYLCIASNGV-PPTVSKRIKVSVDFPPMLLIPHQLVGAPEGFNVTIECFTEAHP-TSLNY- 346
            .|...|:|||.|.. ....|..:||... |.:..:.:|.....|. .||:.|.....| .|:.: 
Mouse   281 NDEAEYVCIAENKAGEQDASIHLKVFAK-PKITYVENQTAMELEE-QVTLTCEASGDPIPSITWR 343

  Fly   347 -------------WTRGEGPIIHDSHKYKVEATVGLPAYKTHMK---LTIINVSSGDDGIYKCVA 395
                         |||.|          |.|...|....::|.:   ||:.::...|.|.|.|.|
Mouse   344 TSTRNISSEEKASWTRPE----------KQETLDGHMVVRSHARVSSLTLKSIQYTDAGEYICTA 398

  Fly   396 KNPRGETDGIIRLYVSYPPTTASS-GIYSTDTHWGENGIN---NNYAYGGPDSTRSIYAQDKNTR 456
            .|..|:....:.|.|.|.|..... .:|:    |..|.:|   ..:||  |.:|.| :.:|....
Mouse   399 SNTIGQDSQSMYLEVQYAPKLQGPVAVYT----WEGNQVNITCEVFAY--PSATIS-WFRDGQLL 456

  Fly   457 YQSNLNEIGL--SEQKSFLDKTQNPLLANGNAN 487
            ..||.:.|.:  :...|:|:.|.:.....||.|
Mouse   457 PSSNYSNIKIYNTPSASYLEVTPDSENDFGNYN 489

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
DIP-zetaNP_723441.2 IG_like 120..216 CDD:214653 18/97 (19%)
Ig 130..200 CDD:143165 16/71 (23%)
I-set 226..310 CDD:254352 26/92 (28%)
IGc2 233..298 CDD:197706 21/72 (29%)
Ig 313..410 CDD:299845 26/114 (23%)
IG_like 325..410 CDD:214653 24/102 (24%)
Ncam1XP_006510118.1 Ig1_NCAM-1 20..115 CDD:143273
IG 124..190 CDD:214652 21/98 (21%)
Ig3_NCAM-1_like 211..308 CDD:143207 26/98 (27%)
Ig_NCAM-1 307..413 CDD:143277 26/117 (22%)
Ig_3 417..494 CDD:372822 20/80 (25%)
FN3 509..606 CDD:238020
fn3 649..731 CDD:365830
PHA03247 <905..1140 CDD:223021
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3510
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR12231
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.910

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