DRSC/TRiP Functional Genomics Resources

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Protein Alignment DIP-zeta and Dscaml1

DIOPT Version :9

Sequence 1:NP_723441.2 Gene:DIP-zeta / 34231 FlyBaseID:FBgn0051708 Length:532 Species:Drosophila melanogaster
Sequence 2:NP_001074739.2 Gene:Dscaml1 / 114873 MGIID:2150309 Length:2053 Species:Mus musculus


Alignment Length:621 Identity:137/621 - (22%)
Similarity:199/621 - (32%) Gaps:217/621 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly    46 GKHPSGSKTVATGVVPNFGGAAGNGAGGGGPVAGSGTGSTVVGSNGVIVAGGGANVPTSNLNIVV 110
            |.|.:...|::.|...:.....|.....||....:...|  |||            ......|.|
Mouse   452 GSHRTNQYTMSDGTTISHMNVTGPQIRDGGVYRCTARNS--VGS------------AEYQARINV 502

  Fly   111 EEPEFTEYIENVTVPAGRNVKLGCSVKNLGSYKVAWMHFEQSAILTVHNH--VITRN-------- 165
            ..|.....:.|:|..|||:..:.|.|.....|.:.|.   :.|:|...||  |:..|        
Mouse   503 RGPPSIRAMRNITAVAGRDTLINCRVIGYPYYSIKWY---KDALLLPDNHRQVVFENGTLKLTDV 564

  Fly   166 ----------------PRISVTHDKHDRHR----------------------------------T 180
                            |::|::...|...:                                  |
Mouse   565 QKGMDEGEYLCSVLIQPQLSISQSVHVAVKVPPLIQPFEFPPASIGQLLYIPCVVSSGDMPIRIT 629

  Fly   181 W----------------------YLHINNVHEEDRGRYMCQIN----TVTAKTQFGYLNVVVPPN 219
            |                      .|.|::|..:..|.|.|..:    ||:.:.|   |.|.|||.
Mouse   630 WRKDGQVIISGSGVTIESKEFMSSLQISSVSLKHNGNYTCIASNAAATVSRERQ---LIVRVPPR 691

  Fly   220 IDDSLSSSDVIVREGANISLRCRASGSPRPIIKWKRDDNS-------------RIAINKNHIVNE 271
            .....::.|.|.  |....|.|...|.|.|.:.||....|             ||.|..|     
Mouse   692 FVVQPNNQDGIY--GKAGVLNCSVDGYPPPKVMWKHAKGSGNPQQYHPVPLTGRIQILPN----- 749

  Fly   272 WEGDTLEITRISRLDMGAYLCIASNGVPPTVSKRIKVSVDFPPMLLIPHQLVGAPEGFNVTIECF 336
               .:|.|..:...|:|.|||.|||||...:||.:.::|..|.|      :...|   |.||.  
Mouse   750 ---SSLLIRHVLEEDIGYYLCQASNGVGTDISKAMFLTVKIPAM------ITSHP---NTTIA-- 800

  Fly   337 TEAHPTSLNYWTRGEGPIIHDSHKYKVEATVGLPAYKTHMKLTIINVSSGDDGI----------- 390
            .:.||..||...|||.|||   .:::...||..|  ...|:..|....:||:.:           
Mouse   801 IKGHPKELNCTARGERPII---IRWEKGDTVIDP--DRVMRYAIATKDNGDEVVSTLKLKPADRG 860

  Fly   391 ----YKCVAKNPRGETDGIIRLYVSYPPTTASSGI-----YSTDTHWGE----NGI--------- 433
                :.|.|.|..||..|:|:|.|..||......|     .|.:..|.:    |.|         
Mouse   861 DSVFFSCHAINSYGEDRGLIQLTVQEPPDPPELEIREVKARSMNLRWTQRFDGNSIITGFDIEYK 925

  Fly   434 NNNYAYGGPDSTRSIYAQDKNTRYQSNL----------------NEIGLSEQKSFL--------- 473
            |.:.::....|||:|    ..|..|:|:                |:||.||....|         
Mouse   926 NKSDSWDFKQSTRNI----SPTINQANIVDLHPASVYSIRMYSFNKIGRSEPSKELTISTEEAAP 986

  Fly   474 -----DKTQNPLLANG-----NANEADAESNGARGH 499
                 |.|..|:.:..     .|.:.:.::...||:
Mouse   987 DGPPMDVTLQPVTSQSIQVTWKAPKKELQNGVIRGY 1022

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
DIP-zetaNP_723441.2 IG_like 120..216 CDD:214653 31/181 (17%)
Ig 130..200 CDD:143165 21/151 (14%)
I-set 226..310 CDD:254352 29/96 (30%)
IGc2 233..298 CDD:197706 23/77 (30%)
Ig 313..410 CDD:299845 31/111 (28%)
IG_like 325..410 CDD:214653 29/99 (29%)
Dscaml1NP_001074739.2 IGc2 43..110 CDD:197706
Ig 125..218 CDD:353325
I-set 226..311 CDD:336764
Ig_3 317..389 CDD:339005
Ig 408..498 CDD:353325 11/59 (19%)
IGc2 519..577 CDD:197706 12/60 (20%)
Ig 615..681 CDD:319273 10/65 (15%)
Ig_DSCAM 707..785 CDD:143211 26/85 (31%)
Ig 803..891 CDD:353325 28/92 (30%)
FN3 887..981 CDD:238020 21/97 (22%)
FN3 988..1085 CDD:238020 6/35 (17%)
FN3 1093..1186 CDD:238020
FN3 1191..1282 CDD:238020
Ig 1307..1377 CDD:319273
FN3 1384..1474 CDD:238020
FN3 1488..1560 CDD:238020
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1716..1741
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1773..1803
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1840..1862
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1974..2053
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3510
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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