DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG9582 and SCaMC

DIOPT Version :10

Sequence 1:NP_609270.1 Gene:CG9582 / 34230 FlyBaseID:FBgn0032090 Length:300 Species:Drosophila melanogaster
Sequence 2:NP_729802.1 Gene:SCaMC / 39415 FlyBaseID:FBgn0052103 Length:583 Species:Drosophila melanogaster


Alignment Length:183 Identity:52/183 - (28%)
Similarity:81/183 - (44%) Gaps:34/183 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    16 QFLAGGLSGFIEIICFHPLDVVKTRMQIQGAHPFGGEVVYTCPLDAIVKIYRYEGLSSLWKGIVP 80
            :|.||..:|.|.....:|::|:|||:.::....:.|..      ||.||||:.||:.|.::|.||
  Fly   381 RFYAGAAAGGISQTIIYPMEVLKTRLALRRTGQYAGIA------DAAVKIYKQEGVRSFYRGYVP 439

  Fly    81 PICVETPKRGGKFLMYESLKPYF---QFGAPQPTPLTHAMSGSMAAILESFLVNPFEVVKITQQ- 141
            .|....|..|....:||:||..:   .....||:.|.....||.::.|......|..:|:...| 
  Fly   440 NILGILPYAGIDLAVYETLKRRYIANHDNNEQPSFLVLLACGSTSSTLGQLCSYPLALVRTRLQA 504

  Fly   142 ---------------------AHRGKRLKTLSVVKYIIKHDGYGIKGLYRGIT 173
                                 ||.|:...| .:.:.|::.:  |:.|||||||
  Fly   505 QAAETIANQKRKTQIPLKSSDAHSGEETMT-GLFRKIVRQE--GLTGLYRGIT 554

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG9582NP_609270.1 Mito_carr 17..104 CDD:395101 30/89 (34%)
Mito_carr 109..196 CDD:395101 22/87 (25%)
Mito_carr 216..295 CDD:395101
SCaMCNP_729802.1 FRQ1 114..242 CDD:444056
PTZ00169 290..559 CDD:240302 52/183 (28%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.