DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG9582 and Shawn

DIOPT Version :9

Sequence 1:NP_001285773.1 Gene:CG9582 / 34230 FlyBaseID:FBgn0032090 Length:300 Species:Drosophila melanogaster
Sequence 2:NP_001027071.1 Gene:Shawn / 3772641 FlyBaseID:FBgn0031039 Length:387 Species:Drosophila melanogaster


Alignment Length:341 Identity:81/341 - (23%)
Similarity:138/341 - (40%) Gaps:65/341 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    16 QFLAGGLSGFIEIICF-HPLDVVKTRMQIQGAHPF--------GGEVVYTCP------------- 58
            |.:|...:|.:...|| .||||:|||:|.|.....        .|.:.:.||             
  Fly    41 QQVASACTGAMVTACFMTPLDVIKTRLQAQQQALLSNKCFLYCNGLMDHICPCGPDTPNPAAAKP 105

  Fly    59 -------LDAIVKIYRYEGLSSLWKGIVPPICVETPKRGGKFLMYESLKPYF------------- 103
                   :||.:||.|.||:.|||.|:.|.:....|.....|:.||..|..|             
  Fly   106 APRFSGTIDAFIKISRTEGIGSLWSGLSPTLISALPSTIIYFVAYEQFKARFTDIHYKYTRRPDT 170

  Fly   104 -QFGAPQPTP-LTHAMSGSMAAILESFLVNPFEVVKITQQAHRGKRLKTLSVVKYIIKHDGYGIK 166
             ....|.|.| |...::|....||....|:|.|:::...|:.|....:....::.:::  ..|:.
  Fly   171 IAHDIPHPIPFLVPLLAGVSGRILAVTCVSPVELIRTKMQSQRMTHAEMFGTIRQVVQ--SQGVL 233

  Fly   167 GLYRGITALVARNAVFHFGFFGFYNALKD---IVPSPEDKTYNILRKVIIAGLASSLACVMSVTL 228
            ||:||:...:.|:..|...::..|..||.   :|    :.|::.  ......::.|:|..::...
  Fly   234 GLWRGLPPTILRDVPFSGIYWTCYEYLKSSFGVV----EPTFSF--SFAAGAISGSVAATITTPF 292

  Fly   229 DMAKCRIQ---------GPQPVKGEVKYQWTISTIKSTFKEEGFRSLFKGLGAMILRVGPGGAML 284
            |:.|...|         ...|.| :|..:.....:.|.::..|..::|.|||..:.:|.|..|::
  Fly   293 DVVKTHEQIEFGEKFIFSDNPPK-QVATKSVAMRLASIYRMGGVPAIFSGLGPRLFKVAPACAIM 356

  Fly   285 LVTYEYLFEFLKSQNI 300
            :.::||...|....||
  Fly   357 ISSFEYGKSFFYHYNI 372

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG9582NP_001285773.1 PTZ00169 17..296 CDD:240302 78/334 (23%)
Mito_carr 17..104 CDD:278578 34/129 (26%)
Mito_carr 109..196 CDD:278578 21/90 (23%)
Mito_carr 216..295 CDD:278578 19/87 (22%)
ShawnNP_001027071.1 Mito_carr 39..159 CDD:278578 35/117 (30%)
Mito_carr 178..265 CDD:278578 21/88 (24%)
Mito_carr 268..371 CDD:278578 21/105 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45441507
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
21.840

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