DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG9582 and Rim2

DIOPT Version :9

Sequence 1:NP_001285773.1 Gene:CG9582 / 34230 FlyBaseID:FBgn0032090 Length:300 Species:Drosophila melanogaster
Sequence 2:NP_608615.1 Gene:Rim2 / 33350 FlyBaseID:FBgn0031359 Length:365 Species:Drosophila melanogaster


Alignment Length:361 Identity:82/361 - (22%)
Similarity:142/361 - (39%) Gaps:93/361 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 SEETVRSLAHWQFLAGGLSGFIEIICFHPLDVVKTRMQIQ--------------GAHPFGGE--- 52
            ::.|..:|.|  .:|||.:|.:..:...||:|||||:|..              |....||:   
  Fly     2 AQNTADTLIH--LIAGGSAGTVGAVVTCPLEVVKTRLQSSTAFMTPSRLAENAGGGPANGGQSEL 64

  Fly    53 ------------------------------------VVYTCPLD-AIVKIYRY----EGLSSLWK 76
                                                :..|.|.. :||:..|:    ||..:|:|
  Fly    65 LRPEQRRKLSTTILRNRSQPQVIGGVRRIMAISHCGISSTTPKSMSIVQCLRHIVQNEGPRALFK 129

  Fly    77 GIVPPICVETPKRGGKFLMYESLKPYF-QFG-APQPTPLTHAMSGSMAAILESFLVNPFEVVKIT 139
            |:.|.:....|.|...|..|...|... ..| ..:.:||.|.||.:.|..:.|...||...||..
  Fly   130 GLGPNLVGVAPSRAIYFCTYSQTKNTLNSLGFVERDSPLVHIMSAASAGFVSSTATNPIWFVKTR 194

  Fly   140 QQAHRGKRLKTLSVVKYIIKH---DGYGIKGLYRGITALVARNAVFHFGF------FGFYNALKD 195
            .|.....:::  ..|:..|:.   .| |:...|:||||       .:||.      |..|..:|.
  Fly   195 MQLDYNSKVQ--MTVRQCIERVYAQG-GVAAFYKGITA-------SYFGICETMVHFVIYEFIKS 249

  Fly   196 IVPSPEDKTY-------NILRKVIIAGLASSLACVMSVTLDMAKCRIQGPQPVKGEVKYQWTIST 253
            .:....::.:       :.|..::...::.::|..::...::|:.|::    .:|. ||.....|
  Fly   250 KLLEQRNQRHTDTKGSRDFLEFMMAGAVSKTIASCIAYPHEVARTRLR----EEGN-KYNSFWQT 309

  Fly   254 IKSTFKEEGFRSLFKGLGAMILRVGPGGAMLLVTYE 289
            :.:.:||||...|::||...::|..|..|:::.|||
  Fly   310 LHTVWKEEGRAGLYRGLATQLVRQIPNTAIMMATYE 345

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG9582NP_001285773.1 PTZ00169 17..296 CDD:240302 79/349 (23%)
Mito_carr 17..104 CDD:278578 31/145 (21%)
Mito_carr 109..196 CDD:278578 26/95 (27%)
Mito_carr 216..295 CDD:278578 20/74 (27%)
Rim2NP_608615.1 Mito_carr 8..156 CDD:278578 33/149 (22%)
Mito_carr 163..253 CDD:278578 26/99 (26%)
Mito_carr 268..355 CDD:278578 21/83 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45442120
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
10.930

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