Protein Alignment Rcd-1r and CAF40

DIOPT Version :9

• Sequence 1: NP_609269.1
• Gene: Rcd-1r / 34229
• FlyBaseID: FBgn0032089
• Length: 290
• Species: Drosophila melanogaster
• Sequence 2: NP_014111.1
• Gene: CAF40 / 855428
• SGDID: S000005232
• Length: 373
• Species: Saccharomyces cerevisiae
• Alignment Length: 263
• Identity: 125/263 - (47%)
• Similarity: 173/263 - (65%)
• Gaps: 3/263 - (1%)

  Fly    20 VYQLIIELAYPATRETALLEL--SKNTYADLAPMLWKSVGTTCTLLQEIVNIYPIITTPVLKANQ 82
            ||..|.:|.|...:|.|||||  .:..:.|||.:||.|.|...:||.||:::||::...:|..|.
Yeast   106 VYHWICQLTYGPQKEQALLELGRKREQFDDLAVVLWSSFGVMTSLLNEIISVYPMLQPQMLSNNL 170

  Fly    83 SNRVCYALTLLQCVASHPETRPAFLRDQIPMYLYPFLSTTFKSRPFEQLRLTTLGVINALAETGD 147
            |||||.||.|||||||||||:..||:..||::|:|||:||.:.|.||.||||:||||.||.:...
Yeast   171 SNRVCNALVLLQCVASHPETKHLFLQAHIPLFLFPFLNTTSRQRTFEYLRLTSLGVIGALVKNDS 235

  Fly   148 TEVLIFLIWSEVVPHCLTNMVRGSKLTKIAATSILEKILLDEMGLTYICENHDRFSQVAITLGKM 212
            .:|:.||:.:::||.||..|...|:|:|..|..||:|||||::||.|||...:||..|...|..|
Yeast   236 QDVITFLLRTDIVPLCLRIMESSSELSKTVAIFILQKILLDDVGLQYICATLERFYAVTNVLKDM 300

  Fly   213 VIHM-LKFPCLRVLKHVVRCYLLLTENARARSALRVCLPDLLRDGTFTSLVQHDTCTKQWLQMLL 276
            |.|: :..|..|:|||::||||.|:::..||..|::.||..|||.|||.:::.|..:|:.|..||
Yeast   301 VEHLTVSTPPGRLLKHIIRCYLRLSDDLEARRLLKIVLPAKLRDNTFTEVLRDDVGSKRCLAQLL 365

  Fly   277 KNL 279
            ..|
Yeast   366 LTL 368

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Rcd-1r	NP_609269.1	Rcd1	32..279	CDD:281998	119/249 (48%)
CAF40	NP_014111.1	RCD1	30..373	CDD:227534	125/263 (48%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	1	0.930	-	-		C157345479
Domainoid	1	1.000	295	1.000	Domainoid score	I227
eggNOG	1	0.900	-	-		E1_COG5209
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	1	1.050	300	1.000	Inparanoid score	I501
Isobase	0	0.000	Not matched by this tool.
OMA	1	1.010	-	-		QHG53719
OrthoFinder	1	1.000	-	-		FOG0003765
OrthoInspector	1	1.000	-	-		otm46485
orthoMCL	0	0.000	Not matched by this tool.
Panther	1	1.100	-	-	O	PTHR12262
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	1	1.000	-	-		X2622
TreeFam	1	0.960	-	-
	11	10.860