Protein Alignment Rcd-1r and CAF40

DIOPT Version :10

• Sequence 1: NP_609269.1
• Gene: Rcd-1r / 34229
• FlyBaseID: FBgn0032089
• Length: 290
• Species: Drosophila melanogaster
• Sequence 2: NP_014111.1
• Gene: CAF40 / 855428
• SGDID: S000005232
• Length: 373
• Species: Saccharomyces cerevisiae
• Alignment Length: 263
• Identity: 125/263 - (47%)
• Similarity: 173/263 - (65%)
• Gaps: 3/263 - (1%)

  Fly    20 VYQLIIELAYPATRETALLEL--SKNTYADLAPMLWKSVGTTCTLLQEIVNIYPIITTPVLKANQ 82
            ||..|.:|.|...:|.|||||  .:..:.|||.:||.|.|...:||.||:::||::...:|..|.
Yeast   106 VYHWICQLTYGPQKEQALLELGRKREQFDDLAVVLWSSFGVMTSLLNEIISVYPMLQPQMLSNNL 170

  Fly    83 SNRVCYALTLLQCVASHPETRPAFLRDQIPMYLYPFLSTTFKSRPFEQLRLTTLGVINALAETGD 147
            |||||.||.|||||||||||:..||:..||::|:|||:||.:.|.||.||||:||||.||.:...
Yeast   171 SNRVCNALVLLQCVASHPETKHLFLQAHIPLFLFPFLNTTSRQRTFEYLRLTSLGVIGALVKNDS 235

  Fly   148 TEVLIFLIWSEVVPHCLTNMVRGSKLTKIAATSILEKILLDEMGLTYICENHDRFSQVAITLGKM 212
            .:|:.||:.:::||.||..|...|:|:|..|..||:|||||::||.|||...:||..|...|..|
Yeast   236 QDVITFLLRTDIVPLCLRIMESSSELSKTVAIFILQKILLDDVGLQYICATLERFYAVTNVLKDM 300

  Fly   213 VIHM-LKFPCLRVLKHVVRCYLLLTENARARSALRVCLPDLLRDGTFTSLVQHDTCTKQWLQMLL 276
            |.|: :..|..|:|||::||||.|:::..||..|::.||..|||.|||.:::.|..:|:.|..||
Yeast   301 VEHLTVSTPPGRLLKHIIRCYLRLSDDLEARRLLKIVLPAKLRDNTFTEVLRDDVGSKRCLAQLL 365

  Fly   277 KNL 279
            ..|
Yeast   366 LTL 368

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Rcd-1r	NP_609269.1	Rcd1	23..279	CDD:461160	122/258 (47%)
CAF40	NP_014111.1	RCD1	30..373	CDD:227534	125/263 (48%)