DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rcd-1r and AT2G32550

DIOPT Version :10

Sequence 1:NP_609269.1 Gene:Rcd-1r / 34229 FlyBaseID:FBgn0032089 Length:290 Species:Drosophila melanogaster
Sequence 2:NP_180814.2 Gene:AT2G32550 / 817816 AraportID:AT2G32550 Length:322 Species:Arabidopsis thaliana


Alignment Length:297 Identity:93/297 - (31%)
Similarity:142/297 - (47%) Gaps:26/297 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 SAEPSPVMSPQQQAEREKVYQLIIELAYPAT--RETALLELS--KNTYADLAPMLWKSVGTTCTL 62
            |:.|.|.:|.......|.:.|.:.::..|.:  .:.||..|:  :|.:..|..:||:|..|...:
plant    31 SSAPPPRLSVVAHPTVEMIIQWVCDIHKPKSYMSDFALHNLAYHRNDFEFLPSLLWESKNTVYIM 95

  Fly    63 LQEI------------VNIYPIITTPVLKANQSNRVCYALTLLQCVASHPETRPAFLRDQIPMYL 115
            |||:            :.::|....|:       ||.....|.|.:|.||:|...|||.::|.|.
plant    96 LQEVFEAYRHLAGHISLRLFPHPLNPL-------RVYNVFLLFQSMACHPDTSRQFLRAKMPNYF 153

  Fly   116 YPFLSTTFKSRPFEQLRLTTLGVI-NALAETGDTEVLIFLIWSEVVPHCLTNMVRGSKLTKIAAT 179
            ||.:.|....:..|.:||..|||| :.|..:.|..|..:|:.|.||..|:..:..||..||..|.
plant   154 YPLMDTGLIDKSDECMRLAALGVIAHMLKASEDGAVNRYLMESGVVGFCVKPIEFGSTETKKVAL 218

  Fly   180 SILEKILLDEMGLTYICENHDRFSQVAITLGKMVIHMLKF--PCLRVLKHVVRCYLLLTENARAR 242
            .||:||:..:.||.|.|...|||..:...|.|::.::...  |...:...|..||:.|::|:|||
plant   219 YILDKIMSTDQGLYYCCVLADRFYVIDELLKKVLFYLSNMVRPPSSLFSLVTGCYVKLSQNSRAR 283

  Fly   243 SALRVCLPDLLRDGTFTSLVQHDTCTKQWLQMLLKNL 279
            :.:|...|.||.||||:.|...|.........||:||
plant   284 NGIRRYTPFLLFDGTFSRLYAEDPVAANNRIQLLQNL 320

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rcd-1rNP_609269.1 Rcd1 23..279 CDD:461160 85/274 (31%)
AT2G32550NP_180814.2 Rcd1 52..320 CDD:461160 85/274 (31%)

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