Protein Alignment Rcd-1r and cnot9

DIOPT Version :10

• Sequence 1: NP_609269.1
• Gene: Rcd-1r / 34229
• FlyBaseID: FBgn0032089
• Length: 290
• Species: Drosophila melanogaster
• Sequence 2: NP_989024.1
• Gene: cnot9 / 394620
• XenbaseID: XB-GENE-1001082
• Length: 299
• Species: Xenopus tropicalis
• Alignment Length: 289
• Identity: 173/289 - (59%)
• Similarity: 211/289 - (73%)
• Gaps: 3/289 - (1%)

  Fly     3 AEPSPVMSPQQQAEREKVYQLIIELAYPATRETALLELSK--NTYADLAPMLWKSVGTTCTLLQE 65
            |..:||.:...|.:|||:||.|.||:.|.|||.|||||||  .:..|||||||.|.||...||||
 Frog     5 ATAAPVPAALAQVDREKIYQWINELSSPDTRENALLELSKKRESVPDLAPMLWHSFGTIAALLQE 69

  Fly    66 IVNIYPIITTPVLKANQSNRVCYALTLLQCVASHPETRPAFLRDQIPMYLYPFLSTTFKSRPFEQ 130
            ||||||.|..|.|.|:||||||.||.||||||||||||.|||...||::|||||.|..|:||||.
 Frog    70 IVNIYPSINPPTLTAHQSNRVCNALALLQCVASHPETRSAFLAAHIPLFLYPFLHTVSKTRPFEY 134

  Fly   131 LRLTTLGVINALAETGDTEVLIFLIWSEVVPHCLTNMVRGSKLTKIAATSILEKILLDEMGLTYI 195
            ||||:||||.||.:|.:.||:.||:.:|::|.||..|..||:|:|..||.||:|||||:.||.||
 Frog   135 LRLTSLGVIGALVKTDEQEVINFLLTTEIIPLCLRIMESGSELSKTVATFILQKILLDDTGLAYI 199

  Fly   196 CENHDRFSQVAITLGKMVIHMLKFPCLRVLKHVVRCYLLLTENARARSALRVCLPDLLRDGTFTS 260
            |:.::|||.||:.|||||:.:.|.|..|:|||||||||.|::|.|||.|||.||||.|:|.||..
 Frog   200 CQTYERFSHVAMILGKMVLQLSKEPSARLLKHVVRCYLRLSDNPRAREALRQCLPDQLKDTTFAQ 264

  Fly   261 LVQHDTCTKQWLQMLLKNLQTNAV-NPMG 288
            :::.||.||:||..|:||||...| :|.|
 Frog   265 VLKDDTTTKRWLAQLVKNLQEGQVTDPRG 293

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Rcd-1r	NP_609269.1	Rcd1	23..279	CDD:461160	158/257 (61%)
cnot9	NP_989024.1	Rcd1	25..283	CDD:461160	158/257 (61%)