DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG13102 and Lypd2

DIOPT Version :9

Sequence 1:NP_001245948.1 Gene:CG13102 / 34228 FlyBaseID:FBgn0032088 Length:150 Species:Drosophila melanogaster
Sequence 2:NP_080947.1 Gene:Lypd2 / 68311 MGIID:1915561 Length:127 Species:Mus musculus


Alignment Length:152 Identity:36/152 - (23%)
Similarity:56/152 - (36%) Gaps:48/152 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 LIVSILVAFVCVQIADSLKCYTCVTP---KDCKSPKKVTCTNAAANETS-----YYLGVYHQNVG 62
            |:..||..|  .::|.:|:||||..|   .:|     ||.|:...|||.     |.|.:....:|
Mouse     8 LLALILGTF--GELAMALQCYTCANPVSASNC-----VTTTHCHINETMCKTTLYSLEIVFPFLG 65

  Fly    63 NLTSTRFDCLALKYNWNNDVIHQLHGCVHPNVGACSLALKPA----YAHYNKTWCLTCSGDKCNK 123
            :.|.|:                           :|:...:|:    ........|  |:.|.||.
Mouse    66 DSTVTK---------------------------SCASKCEPSDVDGIGQTRPVSC--CNSDLCNV 101

  Fly   124 NPAGKMSSSTIAIASSVLGLLL 145
            :.|..:.|....:.:..|.|||
Mouse   102 DGAPSLGSPGGLLLALALFLLL 123

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG13102NP_001245948.1 None
Lypd2NP_080947.1 LU 23..102 CDD:238065 25/112 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1592016at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.010

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