DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG13102 and Ly6i

DIOPT Version :9

Sequence 1:NP_001245948.1 Gene:CG13102 / 34228 FlyBaseID:FBgn0032088 Length:150 Species:Drosophila melanogaster
Sequence 2:NP_001344934.1 Gene:Ly6i / 57248 MGIID:1888480 Length:134 Species:Mus musculus


Alignment Length:153 Identity:33/153 - (21%)
Similarity:54/153 - (35%) Gaps:36/153 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 MKALIVSILVAFVCVQIADSLKCYTCV-TPKDCKSPKKVTCTN----AAANETSYYLGVYHQNVG 62
            :|:.::.:||..:|.:.|..|:||.|. .|.:...| ..||..    ..|.|..:......:.|.
Mouse     7 IKSCVLILLVTLLCAERAQGLECYQCYGVPFETSCP-SFTCPYPDGFCVAQEEEFIANSQRKKVK 70

  Fly    63 NLTSTRF--DCLALKYNWNNDVIHQLHGCVHPNVGACSLALKPAYAHYNKTWCLTCSGDKCNKN- 124
            :.:...|  |.:..|:            .:.||               .|.....|..|.||.. 
Mouse    71 SRSCHPFCPDEIEKKF------------ILDPN---------------TKMNISCCQEDLCNAAV 108

  Fly   125 PAGKMSSSTIAIASSVLGLLLVK 147
            |.|..|.:|..:....||.:|::
Mouse   109 PTGGSSWTTAGVLLFSLGSVLLQ 131

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG13102NP_001245948.1 None
Ly6iNP_001344934.1 UPAR_LY6 29..105 CDD:333773 18/103 (17%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1592016at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.010

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