DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG9568 and Ly6l

DIOPT Version :9

Sequence 1:NP_609267.1 Gene:CG9568 / 34227 FlyBaseID:FBgn0032087 Length:150 Species:Drosophila melanogaster
Sequence 2:XP_003750414.2 Gene:Ly6l / 686432 RGDID:1597652 Length:190 Species:Rattus norvegicus


Alignment Length:137 Identity:32/137 - (23%)
Similarity:54/137 - (39%) Gaps:42/137 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MWKKIIFCVV---LVAFVVVPFANSLTCSKC--------TSPSGCKSPSSETCSNSTANANKEFL 54
            :|..::...:   |:| .||| |.:|:|.:|        ..|..|: ||.:.|.     :|:..|
  Rat    58 LWASLVSVELTRGLMA-TVVP-ARNLSCFQCFKVRRASLCHPMECQ-PSEKVCV-----SNEVLL 114

  Fly    55 EGYHSNVPTVNGSLSFSCANLTYYHAANYTHTFEFLGCVFNETNVCNLSLNNTASGWSKKCLQCG 119
              |.|.....  .:|..||                :.|. |..::...|:.|..:..:::|  |.
  Rat   115 --YTSTKSRT--QISKRCA----------------ITCP-NSNDLFEWSVKNIQARITRRC--CS 156

  Fly   120 TDYCNPA 126
            .|:||.|
  Rat   157 WDHCNRA 163

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG9568NP_609267.1 None
Ly6lXP_003750414.2 LU 81..163 CDD:238065 24/110 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1592016at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.010

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