DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Try29F and Gzma

DIOPT Version :10

Sequence 1:NP_523518.2 Gene:Try29F / 34226 FlyBaseID:FBgn0015316 Length:267 Species:Drosophila melanogaster
Sequence 2:NP_703198.2 Gene:Gzma / 266708 RGDID:628640 Length:261 Species:Rattus norvegicus


Alignment Length:229 Identity:83/229 - (36%)
Similarity:123/229 - (53%) Gaps:11/229 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly    41 RIVGGQVANIKDIPYQVSLQ-RSYHFCGGSLIAQGWVLTAAHCTEGSAILLSKVRIG--SSRTSV 102
            ||:||........||.|.|: :....|.|:|||:.||||||||..|..   |:|.:|  |.:...
  Rat    28 RIIGGDTVVPHSRPYMVLLKLKPDSVCAGALIAKNWVLTAAHCIPGKK---SEVILGAHSIKKEP 89

  Fly   103 GGQLVGIKRVHRHPKFDAYTIDFDFSLLELEEYSAKNVTQAFVGLPEQDADIADGTPVLVSGWGN 167
            ..|::.:|:.:.:|.||.:|.:.|..||.|::.:..|...|.:.||::..|:..||...|:|||.
  Rat    90 EQQILSVKKAYPYPCFDKHTHEGDLQLLRLKKKATLNKNVAILHLPKKGDDVKPGTRCHVAGWGR 154

  Fly   168 TQSAQETSAVLRSVTVPKVSQTQCT-EAYGNFGSITD-RMLCAGLPEGGKDACQGDSGGPLAADG 230
            ..:....|..||.|.:..:.:..|. |.:.||..:.. .|:|||...||||:|.|||||||..:|
  Rat   155 FHNKSPPSDTLREVNITVIDRKICNDEKHYNFNPVIGLNMICAGNLRGGKDSCYGDSGGPLLCEG 219

  Fly   231 VLWGVVSWGY--GCARPNYPGVYSRVSAVR-DWI 261
            :..|:.::|.  .|..|..||:|:.:|... |||
  Rat   220 IFRGITAFGLEGTCGDPKGPGIYTLLSDKHLDWI 253

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Try29FNP_523518.2 Tryp_SPc 42..264 CDD:238113 82/228 (36%)
GzmaNP_703198.2 Tryp_SPc 29..256 CDD:238113 82/228 (36%)

Return to query results.
Submit another query.