DRSC/TRiP Functional Genomics Resources

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Protein Alignment Try29F and svh-1

DIOPT Version :10

Sequence 1:NP_523518.2 Gene:Try29F / 34226 FlyBaseID:FBgn0015316 Length:267 Species:Drosophila melanogaster
Sequence 2:NP_501379.2 Gene:svh-1 / 182375 WormBaseID:WBGene00006620 Length:951 Species:Caenorhabditis elegans


Alignment Length:244 Identity:78/244 - (31%)
Similarity:126/244 - (51%) Gaps:30/244 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly    41 RIVGGQVANIKDIPYQVSLQR---SYHFCGGSLIAQGWVLTAAHCTEGSAILLS-KVRIG---SS 98
            |:|||........|:..:|:.   ..|.||.|::.:..::|||||.|....:.| :|.:|   ::
 Worm   712 RVVGGFETVPGAFPWTAALRNKATKAHHCGASILDKTHLITAAHCFEEDERVSSYEVVVGDWDNN 776

  Fly    99 RTSVGGQLVGIKRVHRHPKF------DAYTIDFDFSLLELEEYSAKNVTQAFVGLPEQDADIADG 157
            :|....|:..::|:|.:|.:      |...::..:..:|..||:..      :.||.:|.....|
 Worm   777 QTDGNEQIFYLQRIHFYPLYKDIFSHDIAILEIPYPGIEFNEYAQP------ICLPSKDFVYTPG 835

  Fly   158 TPVLVSGWGN--TQSAQETSAVLRSVTVPKVSQTQCTEAYGNFGSITDRMLCAGLPEGGKDACQG 220
            ...:|||||:  .:.|:...|.|    :|.:::..|..:...:.|::....|||..|||.|:|||
 Worm   836 RQCVVSGWGSMGLRYAERLQAAL----IPIINRFDCVNSSQIYSSMSRSAFCAGYLEGGIDSCQG 896

  Fly   221 DSGGPLAA---DG--VLWGVVSWGYGCARPNYPGVYSRVSAVRDWISSV 264
            |||||.|.   ||  ||.||:|||.|||:...||:|:.|:....|||::
 Worm   897 DSGGPFACRREDGAFVLAGVISWGDGCAQKKQPGIYTMVAPYLSWISAI 945

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Try29FNP_523518.2 Tryp_SPc 42..264 CDD:238113 77/241 (32%)
svh-1NP_501379.2 KR 227..306 CDD:214527
LDLa 320..355 CDD:238060
PAN_AP_HGF 373..434 CDD:238532
LDLa 558..590 CDD:197566
SR 599..681 CDD:214555
Tryp_SPc 713..945 CDD:238113 77/241 (32%)
Blue background indicates that the domain is not in the aligned region.

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