DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Try29F and tmprss2.6

DIOPT Version :10

Sequence 1:NP_523518.2 Gene:Try29F / 34226 FlyBaseID:FBgn0015316 Length:267 Species:Drosophila melanogaster
Sequence 2:XP_002936535.2 Gene:tmprss2.6 / 100494702 XenbaseID:XB-GENE-5798774 Length:695 Species:Xenopus tropicalis


Alignment Length:250 Identity:96/250 - (38%)
Similarity:128/250 - (51%) Gaps:24/250 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly    27 LSLGATVRRPRLDGRIVGGQVANIKDIPYQVSLQRSYHF-CGGSLIAQGWVLTAAHCTEG----- 85
            :|.|  |....:..|||||..|...:.|:|||||....| ||||:|:..|::|||||..|     
 Frog   447 ISCG--VSHNSVTSRIVGGTSAASGNWPWQVSLQDETGFMCGGSIISPKWIVTAAHCVYGLYQSS 509

  Fly    86 ----SAILLSKVRIGSSRTSVGGQLVGIKRVHRHPKFDAYTIDFDFSLLEL-EEYSAKNVTQAFV 145
                .|.:||..|...:.:.:      ::|:..||.|:..:.|.|.:|::| ||.:..:..|. |
 Frog   510 AWRVFAGVLSLPRFNDTNSYL------VERIIAHPGFNLASRDNDIALMKLTEEITFDDKAQP-V 567

  Fly   146 GLPEQDADIADGTPVLVSGWGNTQSAQETSAVLRSVTVPKVSQTQCTEAYGNFGSITDRMLCAGL 210
            .||........|||..:||||.|......||.|:...||.:....|.|:....|:||..|:|||.
 Frog   568 CLPNAGMFWEAGTPCWISGWGTTSEGGNVSASLKYAEVPLIDSKTCNESLVYNGTITSSMICAGY 632

  Fly   211 PEGGKDACQGDSGGPLA--ADGVLW--GVVSWGYGCARPNYPGVYSRVSAVRDWI 261
            ..|..|.|:|||||||.  .:|..|  |..||||||||.|.||||..::....||
 Frog   633 LNGTIDTCKGDSGGPLVTQTNGTWWLVGDTSWGYGCARANKPGVYGNMTTFLGWI 687

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Try29FNP_523518.2 Tryp_SPc 42..264 CDD:238113 91/234 (39%)
tmprss2.6XP_002936535.2 LDLa 109..140 CDD:238060
LDLa <244..268 CDD:238060
LDLa 323..352 CDD:238060
SRCR_2 357..452 CDD:464747 2/6 (33%)
Tryp_SPc 460..687 CDD:238113 90/233 (39%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.