Protein Alignment alien and RPN6

DIOPT Version :9

• Sequence 1: NP_001260276.1
• Gene: alien / 34225
• FlyBaseID: FBgn0013746
• Length: 444
• Species: Drosophila melanogaster
• Sequence 2: NP_010186.1
• Gene: RPN6 / 851461
• SGDID: S000002255
• Length: 434
• Species: Saccharomyces cerevisiae
• Alignment Length: 418
• Identity: 92/418 - (22%)
• Similarity: 173/418 - (41%)
• Gaps: 89/418 - (21%)

  Fly    82 RLCN---YDEMMVRYKQLLTYIKSAVT-----------RNHSEKSI-------------NSILDY 119
            ||.|   |:|....|..||....|..:           ||..|.||             :.:.::
Yeast    13 RLVNEKQYNEAEQVYLSLLDKDSSQSSAAAGASVDDKRRNEQETSILELGQLYVTMGAKDKLREF 77

  Fly   120 I----------STSKNMALLQNF---YETTLDALRD-----------AKNDRLWF---KTNTKLG 157
            |          :.||.:.:|:..   :|...|:|.|           ||.::..|   ..:.||.
Yeast    78 IPHSTEYMMQFAKSKTVKVLKTLIEKFEQVPDSLDDQIFVCEKSIEFAKREKRVFLKHSLSIKLA 142

  Fly   158 KLYFDRSDFTKLQKILKQLHQSCQTDDGEDDLKKGTQLLEIYALEIQMYTVQKNNKKLKALYEQS 222
            .|::.:..:.....::..|.:..:..|.:      ..|::::.||.::|...:|..|.||....:
Yeast   143 TLHYQKKQYKDSLALINDLLREFKKLDDK------PSLVDVHLLESKVYHKLRNLAKSKASLTAA 201

  Fly   223 LHIKSAIPHP--------LIMGVIRECGGKMHLREGEFEKAHTDFFEAFKNY----DESGSPRRT 275
            ....::|..|        |:.|:       :|..:.:::.|.:.|||:|::|    ..:...:..
Yeast   202 RTAANSIYCPTQTVAELDLMSGI-------LHCEDKDYKTAFSYFFESFESYHNLTTHNSYEKAC 259

  Fly   276 TCLKYLVLANMLM------KSGINPFDSQEAKPYKNDPEILAMTNLVNSYQNNDINEFETILRQH 334
            ..|||::|:.:::      |:.:|...::|....:.   |.||..:..:|.|..:.:|.|.|:|:
Yeast   260 QVLKYMLLSKIMLNLIDDVKNILNAKYTKETYQSRG---IDAMKAVAEAYNNRSLLDFNTALKQY 321

  Fly   335 RSNIMADQFIREHIEDLLRNIRTQVLIKLIRPYKNIAIPFIANALNIEPAEVESLLVSCILDDTI 399
            ...:|.|:..|.|...|...:....|.|:|.|::.:.|..|:..:.::..:||..|...|||...
Yeast   322 EKELMGDELTRSHFNALYDTLLESNLCKIIEPFECVEISHISKIIGLDTQQVEGKLSQMILDKIF 386

  Fly   400 KGRIDQVNQVLQL-DKINSSASRYNALE 426
            .|.:||.|..|.: :..|..|:..:|||
Yeast   387 YGVLDQGNGWLYVYETPNQDATYDSALE 414

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
alien	NP_001260276.1	RPN6	104..410	CDD:227488	77/374 (21%)
		PCI	310..414	CDD:396121	30/104 (29%)
RPN6	NP_010186.1	RPN6	1..434	CDD:227488	92/418 (22%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	1	0.930	-	-		C157343906
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	2	1.840