DRSC/TRiP Functional Genomics Resources

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Protein Alignment alien and psmd11a

DIOPT Version :9

Sequence 1:NP_001260276.1 Gene:alien / 34225 FlyBaseID:FBgn0013746 Length:444 Species:Drosophila melanogaster
Sequence 2:NP_001159710.1 Gene:psmd11a / 503934 ZFINID:ZDB-GENE-030131-2711 Length:421 Species:Danio rerio


Alignment Length: Identity:/ - (0%)
Similarity:/ - (0%) Gaps:/ - (0%)


- Green bases have known domain annotations that are detailed below.


Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
alienNP_001260276.1 RPN6 104..410 CDD:227488
PCI 310..414 CDD:396121
psmd11aNP_001159710.1 RPN6 16..420 CDD:227488
PCI 284..388 CDD:279707
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.910

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