DRSC/TRiP Functional Genomics Resources

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Protein Alignment alien and csn2

DIOPT Version :9

Sequence 1:NP_001260276.1 Gene:alien / 34225 FlyBaseID:FBgn0013746 Length:444 Species:Drosophila melanogaster
Sequence 2:NP_001018220.1 Gene:csn2 / 3361420 PomBaseID:SPAPB17E12.04c Length:437 Species:Schizosaccharomyces pombe


Alignment Length:413 Identity:192/413 - (46%)
Similarity:293/413 - (70%) Gaps:4/413 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 DDFMCDDDEDYGLEYSEDSNS--EPDVDLENQYYNSKALKEEEPKAALASFQKVLDLENGEKGEW 68
            :|||.:|||:|..|:.:|.:.  ||.||:||.|||||:||||.|::||.||..:::...||:.||
pombe     3 NDFMLEDDENYDFEFEDDDDDMIEPYVDVENCYYNSKSLKEENPESALTSFYSIVEKCEGEQNEW 67

  Fly    69 GFKALKQMIKINFRLCNYDEMMVRYKQLLTYIK-SAVTRNHSEKSINSILDYISTSKNMALLQNF 132
            .||||||:.||||:|..||:|:..|::||.|.. .::|:|:|||||.:|::|.|:.:|...|:.|
pombe    68 AFKALKQITKINFQLKKYDDMLQSYQRLLGYTNWLSITKNYSEKSIYNIVEYASSCENTEFLEKF 132

  Fly   133 YETTLDALRDAKNDRLWFKTNTKLGKLYFDRSDFTKLQKILKQLHQSCQTDDGE-DDLKKGTQLL 196
            |:.|..||::..|:||..|....:.:....:.::.|.:.:|:|:|:....::.. .|..:||.||
pombe   133 YDVTTKALQNLNNERLMLKVLMHVARFLLTQKNYHKFKYLLRQMHELLSDENNSVADQNRGTHLL 197

  Fly   197 EIYALEIQMYTVQKNNKKLKALYEQSLHIKSAIPHPLIMGVIRECGGKMHLREGEFEKAHTDFFE 261
            |:|:||||||:..::||:||.||:.||.:|:|||||.|||:|||||||||::|.::.:|.|:|||
pombe   198 ELYSLEIQMYSDIEDNKRLKELYQSSLRVKTAIPHPRIMGIIRECGGKMHMQENQWSEAQTNFFE 262

  Fly   262 AFKNYDESGSPRRTTCLKYLVLANMLMKSGINPFDSQEAKPYKNDPEILAMTNLVNSYQNNDINE 326
            :||:|||:||..|...||||||||||.:|.||||||.|.:|||::|.|:|||.||.:||..||..
pombe   263 SFKSYDEAGSSDRIRVLKYLVLANMLSESEINPFDSPETQPYKDNPHIIAMTKLVEAYQIRDITA 327

  Fly   327 FETILRQHRSNIMADQFIREHIEDLLRNIRTQVLIKLIRPYKNIAIPFIANALNIEPAEVESLLV 391
            .|.||:.::.:|:.|.|||::::.:|.:||:||||:|::||.::.:..:|..|.:..:.:|..||
pombe   328 VERILQTYQHDILDDDFIRQYVDKILYSIRSQVLIELVKPYTSVKLSLLAKKLGVSISIIEQALV 392

  Fly   392 SCILDDTIKGRIDQVNQVLQLDK 414
            ..|:|:.:.|:||.||:|..:.:
pombe   393 GLIIDERVNGKIDMVNEVFTISQ 415

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
alienNP_001260276.1 RPN6 104..410 CDD:227488 140/306 (46%)
PCI 310..414 CDD:396121 40/103 (39%)
csn2NP_001018220.1 RPN6 48..418 CDD:227488 167/368 (45%)
PCI 311..415 CDD:279707 40/103 (39%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 314 1.000 Domainoid score I242
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 399 1.000 Inparanoid score I382
OMA 1 1.010 - - QHG53950
OrthoFinder 1 1.000 - - FOG0005623
OrthoInspector 1 1.000 - - oto101334
orthoMCL 1 0.900 - - OOG6_102225
Panther 1 1.100 - - LDO PTHR10678
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R255
SonicParanoid 1 1.000 - - X4026
TreeFam 00.000 Not matched by this tool.
1111.000

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