Protein Alignment alien and Psmd11

DIOPT Version :9

• Sequence 1: NP_001260276.1
• Gene: alien / 34225
• FlyBaseID: FBgn0013746
• Length: 444
• Species: Drosophila melanogaster
• Sequence 2: XP_006247049.1
• Gene: Psmd11 / 303353
• RGDID: 1306450
• Length: 500
• Species: Rattus norvegicus
• Alignment Length: 434
• Identity: 102/434 - (23%)
• Similarity: 189/434 - (43%)
• Gaps: 70/434 - (16%)

  Fly    49 AALASFQKVLDLENGEKGEWGFKALKQMIKINFRLCNYDEMMVRYKQ------------------ 95
            ||:..||:...|.:.:: |.....|..::|.:.:  ..||..|:.|:
  Rat    82 AAVVEFQRAQSLLSTDR-EASIDILHSIVKRDIQ--ENDEEAVQVKEQSILELGSLLAKTGQAAE 143

  Fly    96 ---LLTYIK---SAVTRNHSEKSINSILDYI-----STSKNMALLQNFYETTLDALRDAKNDRLW 149
               ||.|::   :::::..:.:.:.|:||..     :|.:.:       |..|:.:..||:::..
  Rat   144 LGGLLKYVRPFLNSISKAKAARLVRSLLDLFLDMEAATGQEV-------ELCLECIEWAKSEKRT 201

  Fly   150 F---KTNTKLGKLYFDRSDFTKLQKILKQLHQSCQTDDGEDDLKKGTQLLEIYALEIQMYTVQKN 211
            |   ....:|..||||...:.:...:..||.:..:..|.:      ..|:|:..||.:.|....|
  Rat   202 FLRQALEARLVSLYFDTKRYQEALHLGSQLLRELKKMDDK------ALLVEVQLLESKTYHALSN 260

  Fly   212 NKKLKALYEQSLHIKSAI--PHPLIMGVIRECGGKMH-LREGEFEKAHTDFFEAFKNYDESGSPR 273
            ..|.:|....:....:||  | |.:...:....|.:| ..|.:::.|::.|:|||:.||...||:
  Rat   261 LPKARAALTSARTTANAIYCP-PKLQATLDMQSGIIHAAEEKDWKTAYSYFYEAFEGYDSIDSPK 324

  Fly   274 RTTCLKYLVLANMLMKSGINPFDSQE------AKPYKNDPEILAMTNLVNSYQNNDINEFETILR 332
            ..|.|||::|..:::.:   |.|.|.      |..|.. .:..|:..:..:.:|..:.:||..|.
  Rat   325 AITSLKYMLLCKIMLNT---PEDVQALVSGKLALRYAG-RQTEALKCVAQASKNRSLADFEKALT 385

  Fly   333 QHRSNIMADQFIREHIEDLLRNIRTQVLIKLIRPYKNIAIPFIANALNIEPAEVESLLVSCILDD 397
            .:|:.:..|..|..|:..|..|:..|.||::|.|:..:.|..|::.:.:..|:||..|...|||.
  Rat   386 DYRAELRDDPIISTHLAKLYDNLLEQNLIRVIEPFSRVQIEHISSLIKLSKADVERKLSQMILDK 450

  Fly   398 TIKGRIDQVNQVL------QLDKINSSASRYNALEKWSNQIQSL 435
            ...|.:||...||      .:||...:|  ...::..|..:.||
  Rat   451 KFHGILDQGEGVLIIFDEPPVDKTYEAA--LETIQNMSKVVDSL 492

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
alien	NP_001260276.1	RPN6	104..410	CDD:227488	79/322 (25%)
		PCI	310..414	CDD:396121	30/109 (28%)
Psmd11	XP_006247049.1	RPN6	95..499	CDD:227488	97/421 (23%)
		PCI	363..467	CDD:279707	30/103 (29%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	1	1.000	-	-
TreeFam	0	0.000	Not matched by this tool.
	2	1.910