DRSC/TRiP Functional Genomics Resources

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Protein Alignment rost and LOC103911277

DIOPT Version :9

Sequence 1:NP_001260274.1 Gene:rost / 34222 FlyBaseID:FBgn0011705 Length:275 Species:Drosophila melanogaster
Sequence 2:XP_021332981.1 Gene:LOC103911277 / 103911277 -ID:- Length:326 Species:Danio rerio


Alignment Length:260 Identity:68/260 - (26%)
Similarity:126/260 - (48%) Gaps:27/260 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly    16 QRANFGFAYNRVHLF-------YRSQWQKDEINTIYLLYRWIWALFFLGVYIMCVIVQFCDGKFF 73
            ||....|...::|.|       .:.:|  |....::|:||....::.|..:|...:: |...|||
Zfish     9 QRWKEEFTVQKLHFFTSKPELLLQPRW--DIPPVLWLVYRCFMLVYSLSWFIYTALL-FNTPKFF 70

  Fly    74 IYMTNWGFGLCTITMLISAVQVTCWHF-DVRSTRSLVQESGHKAE----TSRGLKIY------WW 127
            |::::..:.|..|..|::...: .|.| ::|......:.:|...|    .|..|.:|      |.
Zfish    71 IFLSHISYCLMVIYYLLAFCNL-AWAFLEIRCCSHRRKRAGVSIECEALLSLSLPLYTALNLQWL 134

  Fly   128 LYNMTLSLALIISTVYWVFLHGKMNKPMRFPAISIITHGMNSVMMLIDFLVIAFPLRILHMVYGM 192
            |:::....:|.:|.:||..:|......:  .|.:|..|.:|||...:|.|:...|:.:.|.:|.:
Zfish   135 LHSVMGCFSLSVSFLYWTIIHPSHQHSL--TAFNINIHFINSVQTAVDLLLSCTPVHLTHFIYPV 197

  Fly   193 SLAIFFFLFTLIYHLCGGTDEFGNHYVYPILDW-NNPNRCMVTFVGIFLLIMCYWVLLFGLYKLK 256
            ..||.:.:|.::|.|.|||::.|..|:|.|||: ..|....::.:|:.|:.:.:..||  |:||:
Zfish   198 LAAILYIIFAVVYWLMGGTNQSGQPYIYSILDFGGRPLLATLSILGVCLVCLPFCQLL--LWKLQ 260

  Fly   257  256
            Zfish   261  260

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
rostNP_001260274.1 Far-17a_AIG1 52..254 CDD:147085 56/213 (26%)
LOC103911277XP_021332981.1 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1191165at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
11.010

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