DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG18088 and CG1428

DIOPT Version :9

Sequence 1:NP_001260271.1 Gene:CG18088 / 34219 FlyBaseID:FBgn0032082 Length:663 Species:Drosophila melanogaster
Sequence 2:NP_610127.1 Gene:CG1428 / 35433 FlyBaseID:FBgn0032967 Length:617 Species:Drosophila melanogaster


Alignment Length:692 Identity:163/692 - (23%)
Similarity:267/692 - (38%) Gaps:143/692 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    21 LTIVLFLIYSSNTSSNTNHDLYPPTTRFSRVSVKAEPQK-FFVKTSKCHIPYVDPFNDEAMELYK 84
            ||.|.|.:|         ..|.|.|..|.|..:...|:: .||.||.||:          ...:|
  Fly    14 LTGVFFTLY---------FGLQPVTEWFERKDLVTAPEEVVFVNTSVCHV----------SGQWK 59

  Fly    85 PQTLITCSNETDLISTTYNEIIKRHILHIDDEVAQKLLNFTD-----KDYNCFYREIKYGKIAD- 143
            |....:.....:.:.....:::        ..:.|...||.:     :|.:|.| .:|.|...: 
  Fly    60 PTAFYSAIEPVNKLRCRMTQLL--------TAITQDGSNFLEAKRISEDLSCRY-WLKSGHTRNH 115

  Fly   144 -----TYDNLKAKKYFTSGYEVPVHVEGMIVECQTADDPIVVLQKDAFAFIQHRPLPKDSIRPRA 203
                 .|.:...|:..|.  ::.:.....||..:.:|........|...|:. .|.|| .:...:
  Fly   116 SGHYTAYGHFDLKRGATR--KIKIGTGEQIVRIRCSDKFKASKYHDVLYFLS-PPDPK-LMSTES 176

  Fly   204 ARKPSVIMYGIDSLSRINLRRTMPKVFNFLQGPGWYEMQGYNKVADNSFPNILAILSGYSASTAK 268
            :.|.||::.||||:|.::..|..|.|..||:.....:..||::|..::..|::..|.|.|:..|.
  Fly   177 SEKLSVMVLGIDSVSHMHFVRYFPLVMAFLENHPHTKFFGYSRVGLDANANLVPFLGGKSSRAAG 241

  Fly   269 ENVCDTDKQGCLDEMPMIWKYFKNASYLTGYAEDE-----SNSNHFNYLKPGFSKKPMDYYFRPL 328
            .::..       ||...:|..||...|.|.|.||.     ||.|....|    .|.|:|:...|:
  Fly   242 SDILS-------DEKAWLWDSFKMEGYSTAYGEDNAKGILSNRNGDKEL----PKSPVDFDLTPV 295

  Fly   329 LRALESEMDVYRLPEHDY--MRYCLGRRIANRYIYDYGLQFTKRFVHDRPIWGMFWSNHFSHDDP 391
            :    .||:.:.....|.  |.:|...|.....:.|:.||... ::...|.:..||.:       
  Fly   296 I----VEMNNHTRYSIDLKEMIHCTAGRKFQDVLRDFVLQLVP-YMQGMPFFSFFWQS------- 348

  Fly   392 FMPSAMQE-------------KVLGDLIDMHADGQFEEMIMIFFADHGTRFGDLTYLKEGFLEER 443
               ..:||             .:|..|:|  || .....::...:|||.|.|:.....:|..||.
  Fly   349 ---QGVQEYYEYAWHLDLSYMMLLKKLLD--AD-ILNNTLLFLMSDHGLRAGEYRMSLQGMKEES 407

  Fly   444 LPMMFIYLPPWFRETYPSYVRALELNQHRLSSNFDLHNTLKHIIEIGGTPDG------------- 495
            .|:|....|.|.:..||..|..||.|.|.|.:.:||..||..:|.:|...|.             
  Fly   408 QPLMVAIYPEWLKRKYPLAVGNLESNAHSLITPYDLRETLADVIALGQLKDANIEVSMKRLQSHP 472

  Fly   496 -RELPKSFDCPTCQSLFYPLPEGRTCSEAGIEEHWCTCEPYKIISGQDWTTPIAHSVIDRMNEYF 559
             ..||:..      |||.|:|:.|||..|.|...:|.|.....:       |....::.|.:.:.
  Fly   473 PNRLPRGI------SLFLPIPDHRTCDLAHIPSLFCFCRELTEV-------PTDDGLVLRSSRFM 524

  Fly   560 VQKNLTSL------CSNLTLNYVHKTEIKTGLNIDWHQTLMESETAVYRIKFKVKQNSAD--FQA 616
            |: ::..|      |..|.|..|.....     :|:.:     |:.||.::.:|:.:..:  ::|
  Fly   525 VE-SINQLIKPFGQCRQLKLEMVLLAHF-----LDFGE-----ESFVYELRLRVRTSPGNGVYEA 578

  Fly   617 TVVYHNSTQNAQVNVEKISRTNSYKEDSTCIDDKLAKLYCIC 658
            ||    ...:..:....|||.:.|...|.||.|...:::|:|
  Fly   579 TV----RLSDVLLLTSPISRVSHYLGQSHCIGDPDLQIFCLC 616

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG18088NP_001260271.1 DUF229 84..577 CDD:281053 127/543 (23%)
ALP_like 207..489 CDD:293745 82/301 (27%)
CG1428NP_610127.1 DUF229 68..547 CDD:281053 125/534 (23%)
ALP_like 180..453 CDD:293745 82/301 (27%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45466450
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_28JJT
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D31599at6960
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR10974
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
54.850

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