DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG18088 and CG3123

DIOPT Version :9

Sequence 1:NP_001260271.1 Gene:CG18088 / 34219 FlyBaseID:FBgn0032082 Length:663 Species:Drosophila melanogaster
Sequence 2:NP_608716.1 Gene:CG3123 / 33478 FlyBaseID:FBgn0031465 Length:634 Species:Drosophila melanogaster


Alignment Length:685 Identity:182/685 - (26%)
Similarity:300/685 - (43%) Gaps:114/685 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    21 LTIVLFLIYSSNTSSNTNHDLYPPTTRFSRVSVKAEPQ-------KFFVKTSKCHIPYVDPFNDE 78
            |.::.:||.:|.:..|            ..:|::..||       :.||.|:.|.|....|.:..
  Fly    16 LAVLCYLILTSLSDRN------------KTISIREVPQIYINEEDELFVNTTGCRISATKPLSLY 68

  Fly    79 AMELYKPQTLITCSNETDLISTTYNE------IIKRHILHIDDEVAQKLLNFTDKDYNCFYREIK 137
            |:...:|...:.|..|..:::.|..:      .|.||          .:|::  :..:|.|||  
  Fly    69 ALSFMEPIEPVLCRMEQLMVAETIGDRNYLVRNISRH----------GILSW--RQVSCIYRE-- 119

  Fly   138 YGKIADTYDNLKAKKYF-----TSGYEVPVHVEGMIVECQTADDPIVVLQKDAFAFIQHRPLPKD 197
            :.::.|.::...:.|:|     |...||...::.:...|......|:.  .|...|:.  |||:.
  Fly   120 FVRVDDAHNKYISLKFFKLTDRTRYLEVGTGLQHIRTWCWVDFGRIIF--HDVMYFLP--PLPQA 180

  Fly   198 SIR--PRAARKPSVIMYGIDSLSRINLRRTMPKVFNFLQGPGWYEMQGYNKVADNSFPNILAILS 260
            :.|  ....||.||::.|:||:|.::..|...:|.:|::.....|..|||:||.|::||::.::|
  Fly   181 TNRSTEHQKRKLSVMILGVDSISHMHYMRYFHRVADFIEHLPHTEFWGYNRVALNTYPNLIPLVS 245

  Fly   261 GYSASTAKENVCDTDKQGCLDEMPMIWKYFKNASYLTGYAEDESNSNHFNYLKPGFSKKPMDYYF 325
            |.|.| ..|..|..|:.. .|:...:|..||.|.|.|.:|||...:..|.|.|.||.|:|.|.|.
  Fly   246 GLSVS-EMEASCYHDELN-FDKCNFLWNEFKRAGYSTIFAEDTDTAGLFIYRKRGFQKQPTDIYM 308

  Fly   326 RPLLRALESEMDVYRLPEHDYMRYCLGRRIANRYIYDYGLQFTKRFVH-DRPIWGMF-WSNHFSH 388
            |||:..:||. .:||.   .:...|.|.|:...:.||:   .:|...| :|.::..| |:.|..|
  Fly   309 RPLMTEIESH-SLYRT---TFDLKCTGHRLYGEFYYDF---VSKLIPHMERQLFFSFLWNMHGIH 366

  Fly   389 DDPFMPSA--MQEKVLGDLIDMHADGQFEEMIMIFFADHGTRFGDLTYLKEGFLEERLPMMFIYL 451
            |  ..|.|  :.:..|..|..:|..|..|..:::|..|||.||........|..|...|::....
  Fly   367 D--VFPYAKFVDKDYLSILTRLHEKGVMENTLILFMGDHGLRFDKFARTAPGQHEMSQPLLIAIY 429

  Fly   452 PPWFRETYPSYVRALELNQHRLSSNFDLHNTLKHIIEIGGTPDGRELPKSFDCPTCQ--SLFYPL 514
            |.|.:..:|..:...|.|...|.:.||||.|||.:|.:....|.....::......:  |||.|:
  Fly   430 PEWLKRRFPLAMSNFERNARSLITTFDLHETLKDVIHLDRLTDANVRNRTLYLTNERGISLFLPI 494

  Fly   515 PEGRTCSEAGIEEHWCTCEPYKIISGQDWTTPIAHS-VIDRMNEY---FVQKNLTSLCSNLTLNY 575
            |:.|.|..|.|::|:|.|...|.:|..:.....|.| .:||:||.   :.|      |..|:|..
  Fly   495 PQNRNCKTAEIKQHYCLCNELKSVSTHESAIQEAASFAVDRINELIKPYPQ------CRVLSLQS 553

  Fly   576 VHKTEIKTGLNIDWHQTLMESETAVYRIKFKVKQ---------NSADFQATVVYHNSTQNAQVNV 631
            |              :|...::::.||..::|.|         ...:|.|||:.      ..:|.
  Fly   554 V--------------RTAYRAKSSTYRGNYRVSQVMVRLKTTPGDGNFDATVLI------TMLNG 598

  Fly   632 EK--------ISRTNSYKEDSTCIDDKLAKLYCIC 658
            ||        ::||:.|...:.|:.:...::||.|
  Fly   599 EKTDMKLGGPVTRTDRYAHQAYCVQNYRIEMYCYC 633

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG18088NP_001260271.1 DUF229 84..577 CDD:281053 147/515 (29%)
ALP_like 207..489 CDD:293745 94/285 (33%)
CG3123NP_608716.1 DUF229 74..555 CDD:281053 148/529 (28%)
ALP_like 192..468 CDD:293745 94/286 (33%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45466448
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_28JJT
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D31599at6960
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR10974
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
54.850

Return to query results.
Submit another query.