DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment C1GalTA and AT1G01570

DIOPT Version :10

Sequence 1:NP_609258.1 Gene:C1GalTA / 34215 FlyBaseID:FBgn0032078 Length:388 Species:Drosophila melanogaster
Sequence 2:NP_001322080.1 Gene:AT1G01570 / 837183 AraportID:AT1G01570 Length:509 Species:Arabidopsis thaliana


Alignment Length:254 Identity:47/254 - (18%)
Similarity:77/254 - (30%) Gaps:62/254 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly   176 WFLKADDDTYTIVENMRYMLYPYSPETPVYFGCKFKPYVKQ-----GYMSGGAGYVLSREAVRRF 235
            |.:..||||....||:..:|..|......|.|...:.:::.     |...||.|:.:|....:  
plant   185 WIVMGDDDTVFFPENLVKVLRKYDHNQFYYIGSSSESHIQNLKFSYGMAYGGGGFAISYPLAK-- 247

  Fly   236 VVEALPNPKLCKSDNSGAEDVEIGKCLQNVNV------------LAGDSRDSNGRGRFFPFVPEH 288
            .:|.:.:..:.:.......|..|..|:..:.|            |.|............|.|..|
plant   248 ALEKMQDRCIQRYSELYGSDDRIHACMSELGVPLTKEVGFHQIDLYGKLLGLLSAHPLAPLVSIH 312

  Fly   289 HL--------------------IPSHTDKKFWYWQYIFYKTDEGLDCCSDNAISFHY-------- 325
            ||                    :|:..|......|.|.|..|.....    ::|:.|        
plant   313 HLDLVDPVFPNMGRVNAMRRFMVPAKLDSPSLAQQSICYDADHRWTV----SVSWGYTVQIIRGV 373

  Fly   326 ------VSPNQMYVLDYLIYHLRPYGIINTPDA-----LPNKLAVGELMPEIKEQATES 373
                  |.|.:.::..|.....|.|.....|.|     .|....:...:|::..:.|.|
plant   374 LSAREMVIPTRTFIDWYKQADERSYAFNTRPIAKSACQRPRVYYLSNALPDLALRRTAS 432

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
C1GalTANP_609258.1 Galactosyl_T 119..>265 CDD:473923 20/93 (22%)
AT1G01570NP_001322080.1 DUF604 224..480 CDD:461378 36/215 (17%)

Return to query results.
Submit another query.