DRSC/TRiP Functional Genomics Resources

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Protein Alignment C1GalTA and AT5G57500

DIOPT Version :9

Sequence 1:NP_609258.1 Gene:C1GalTA / 34215 FlyBaseID:FBgn0032078 Length:388 Species:Drosophila melanogaster
Sequence 2:NP_200558.1 Gene:AT5G57500 / 835854 AraportID:AT5G57500 Length:318 Species:Arabidopsis thaliana


Alignment Length:304 Identity:71/304 - (23%)
Similarity:116/304 - (38%) Gaps:104/304 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly    98 EVRVLCWIMTNPSNHQKKARH-VKRTWG--------KRCNKLIFMSSAKDDELDAVALPV----- 148
            |:|:|..|:|.|..:.:  || ::..:|        |...|.:|.:..|:|:...|||.:     
plant    68 EIRILIGILTLPDQYSR--RHFLRMIYGTQNVPDGVKVDVKFVFCNLTKEDQKVLVALEIMRYDD 130

  Fly   149 ------GEGRNNLWGKTKEAYKYIYEHHI----NDAD-------WFLKADDDTYTIVENMRYMLY 196
                  .|..|.  |||     |.|...:    |:.|       :.:|||||||..:|::...|.
plant   131 IIILNCNENMNK--GKT-----YTYFSSLPDIFNETDAQKPPYHYVMKADDDTYIRLESLVASLR 188

  Fly   197 PYSPETPVYFG----C-KFKPYVKQGYMSGGAGYVLSREAVRRFVVEALPNPKLCKSDNSGAEDV 256
            |. |...:|:|    | ...|:|.  ||| |.||::|.:     :...|.:.::.|....|.||.
plant   189 PL-PREDLYYGYVIPCPSMDPFVH--YMS-GMGYLVSWD-----IAVWLKDSEIPKKHLEGPEDK 244

  Fly   257 EIGKCLQNVNVLAGDSRDSNGRGRF--------FPFVP---EHHLIPSHTDKKFWYWQYIFYKTD 310
            ..|..::         ....|:.||        ||..|   .|.|.|                  
plant   245 VFGDWIR---------EGRRGKNRFNAKWSMYNFPEPPTRCTHELWP------------------ 282

  Fly   311 EGLDCCSDNAISFHYVSPNQMYV--LDY--LIYHLRPYGIINTP 350
                    :.|:.|.:...:.::  |:|  :..:|:|..:.:.|
plant   283 --------DTIAVHLLKNQEKWIRTLNYFNVTSNLKPSKLYHIP 318

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
C1GalTANP_609258.1 Galactosyl_T 119..>265 CDD:304462 47/180 (26%)
AT5G57500NP_200558.1 Galactosyl_T 83..225 CDD:419759 43/159 (27%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1407357at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.010

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