DRSC/TRiP Functional Genomics Resources

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Protein Alignment C1GalTA and AT5G12460

DIOPT Version :9

Sequence 1:NP_609258.1 Gene:C1GalTA / 34215 FlyBaseID:FBgn0032078 Length:388 Species:Drosophila melanogaster
Sequence 2:NP_568279.2 Gene:AT5G12460 / 831121 AraportID:AT5G12460 Length:441 Species:Arabidopsis thaliana


Alignment Length:280 Identity:61/280 - (21%)
Similarity:92/280 - (32%) Gaps:77/280 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly   155 LWGKTKEAYKYIYEHHINDADWFLKADDDTYTIVENMRYMLYPYSPETPVYFGCKFKPY------ 213
            |:...:|::|...:    :..||:..||||...::|:...|..|:.:...|.|...:..      
plant   110 LFYSLQESFKKASK----ETRWFVIGDDDTLFFLDNLVKALDRYNHKKHYYVGMNSENVWSNAIF 170

  Fly   214 -VKQGYMSGGAGYVLSREAVRRFVVEALPNPKLCKSDNSGA-EDVEIGKCLQNV----------- 265
             ...||  ||.||.||...    ||..|.|.:.|.....|. .|:...:||.::           
plant   171 AFDMGY--GGGGYALSYPT----VVTLLSNMEECIKRYLGVYSDLLSFRCLADLGIDLTLEKGMH 229

  Fly   266 -NVLAGDSRDSNGRGRFFPFVPEHH------LIP--------------SHTDKKFWYWQYIFYKT 309
             |.|.||...........|.:..||      :.|              :.||:.....|.|.|:.
plant   230 QNDLHGDISGLLSAHPQSPLISLHHFDVIDPIFPGMNRQQSVNHLMETAKTDQSRVLQQTICYQR 294

  Fly   310 DEGLDCCSDNAISFHYVSPNQMYVLDYLIYHL-------RP--------YG-----IINTPDALP 354
            ............|.|      :|...|...||       ||        ||     :.|.|..:|
plant   295 GYNWSVSVSWGYSVH------IYQSIYPRSHLKRPLETFRPWKDVRIPAYGFNTRRVTNDPCEMP 353

  Fly   355 NKLAVGELMPEIKEQATEST 374
            .:.....:: |.|.|:..:|
plant   354 RQFFFDSVV-EDKNQSLVTT 372

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
C1GalTANP_609258.1 Galactosyl_T 119..>265 CDD:304462 31/117 (26%)
AT5G12460NP_568279.2 Galactosyl_T <126..>184 CDD:304462 17/59 (29%)
Galactosyl_T 167..416 CDD:304462 47/219 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG2246
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X502
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.810

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