DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment C1GalTA and AT4G00295

DIOPT Version :10

Sequence 1:NP_609258.1 Gene:C1GalTA / 34215 FlyBaseID:FBgn0032078 Length:388 Species:Drosophila melanogaster
Sequence 2:NP_567166.2 Gene:AT4G00295 / 828072 AraportID:AT4G00295 Length:467 Species:Arabidopsis thaliana


Alignment Length:215 Identity:46/215 - (21%)
Similarity:74/215 - (34%) Gaps:48/215 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    67 SIDIFGFKFG----------GGSSVNAGFGDAANEDA-SANDDDLVRRRRAL-----DVLGATYA 115
            |.|.||...|          .|.||     :.||.|: |..|..:..:|||.     |::     
plant   814 SCDTFGSYIGTKDNKSKDVSSGGSV-----EVANVDSKSLRDQRIELQRRATEPGEDDLI----- 868

  Fly   116 YVSLLPQSPHGTNVNIVKVSSVSNVNNFGELPAAETATTVAAPVAERRRKRSPDMVQLTAFEKKS 180
                    |.|....:.:..::|..:.....|.......:||..|.:     ..:...:.:....
plant   869 --------PFGDRPTVSRFGAISRTSKALYQPPGPMQQVLAAQGAVK-----SSITDYSLYSHGG 920

  Fly   181 LSVDS-----ELSPDKKLTTHERL-ESVRGGSRTLLREDVARNKRSPQTDGQEEGQDGGPPKGPP 239
            ||..|     .||...:|:..||: :.:....|..||.::.:..:......|..|.:....:...
plant   921 LSAASYPPHQNLSSQGQLSERERISKPLPTSEREQLRMELQQVNQQISQQTQMRGMEVATNRLLL 985

  Fly   240 PRGGPK-GPRGRGPPPGCPP 258
            ||..|. |  .:.|||..||
plant   986 PREAPSLG--NQQPPPPQPP 1003

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
C1GalTANP_609258.1 Galactosyl_T 119..>265 CDD:473923 29/147 (20%)
AT4G00295NP_567166.2 DUF604 218..467 CDD:461378
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.