DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment C1GalTA and C1galt1

DIOPT Version :10

Sequence 1:NP_609258.1 Gene:C1GalTA / 34215 FlyBaseID:FBgn0032078 Length:388 Species:Drosophila melanogaster
Sequence 2:XP_063142739.1 Gene:C1galt1 / 65044 RGDID:621105 Length:390 Species:Rattus norvegicus


Alignment Length:362 Identity:171/362 - (47%)
Similarity:238/362 - (65%) Gaps:23/362 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 ANSLLGRSILNEGRSNKRSFVSLIVGLIVGFCL-AELFVYSTPERSEFMP----YDGH-RHGDVN 61
            :..:..:|.||        |::.:.|..:||.| ::|......|:::..|    .|.| ||.|  
  Rat    25 SQEMASKSWLN--------FLTFLCGSAIGFFLCSQLLNILLQEQADVQPNMLHNDPHARHSD-- 79

  Fly    62 DAHHSHDMMEMSGPEQDVGGHEHVHENSTIAERLYSEVRVLCWIMTNPSNHQKKARHVKRTWGKR 126
            |:.|:|...:|   :.:....:|..||:.:||.||.:|:||||:||:|.|.:|||:|||.||.:|
  Rat    80 DSGHNHLKGQM---DFNADSSQHKDENTDVAENLYQKVKVLCWVMTSPQNLEKKAKHVKATWAQR 141

  Fly   127 CNKLIFMSSAKDDELDAVALPVGEGRNNLWGKTKEAYKYIYEHHINDADWFLKADDDTYTIVENM 191
            |||::||||.::.:...|.|...|||..|:.||.:|::|:::|::.|||||:|||||||.|::|:
  Rat   142 CNKVLFMSSEENKDFPTVGLETKEGREQLYWKTIKAFQYVHDHYLEDADWFMKADDDTYVILDNL 206

  Fly   192 RYMLYPYSPETPVYFGCKFKPYVKQGYMSGGAGYVLSREAVRRFVVEALPNPKLCKSDNSGAEDV 256
            |::|..|:||.|:|||.:|||||||||||||||||||:||:||| |:|....|...|  |..||:
  Rat   207 RWLLSKYNPEQPIYFGRRFKPYVKQGYMSGGAGYVLSKEALRRF-VDAFKTEKCTHS--SSIEDL 268

  Fly   257 EIGKCLQNVNVLAGDSRDSNGRGRFFPFVPEHHLIPSHTDKKFWYWQYIFYKTDEGLDCCSDNAI 321
            .:|:|::.:.|.||||||..|:..|.|||||||||..:..|.||||.|.:|...||..||||.|:
  Rat   269 ALGRCMEIIKVEAGDSRDPTGKETFHPFVPEHHLIKGYLPKTFWYWNYNYYPPVEGPGCCSDIAV 333

  Fly   322 SFHYVSPNQMYVLDYLIYHLRPYG-IINTPDALPNKL 357
            |||||....||.|:||:||||||| :.....|||..:
  Rat   334 SFHYVDSTTMYELEYLVYHLRPYGYLYRYQPALPENI 370

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
C1GalTANP_609258.1 Galactosyl_T 119..>265 CDD:473923 79/145 (54%)
C1galt1XP_063142739.1 None

Return to query results.
Submit another query.