DRSC/TRiP Functional Genomics Resources

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Protein Alignment C1GalTA and C1galt1

DIOPT Version :9

Sequence 1:NP_609258.1 Gene:C1GalTA / 34215 FlyBaseID:FBgn0032078 Length:388 Species:Drosophila melanogaster
Sequence 2:XP_038964253.1 Gene:C1galt1 / 65044 RGDID:621105 Length:371 Species:Rattus norvegicus


Alignment Length:362 Identity:171/362 - (47%)
Similarity:238/362 - (65%) Gaps:23/362 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 ANSLLGRSILNEGRSNKRSFVSLIVGLIVGFCL-AELFVYSTPERSEFMP----YDGH-RHGDVN 61
            :..:..:|.||        |::.:.|..:||.| ::|......|:::..|    .|.| ||.|  
  Rat     6 SQEMASKSWLN--------FLTFLCGSAIGFFLCSQLLNILLQEQADVQPNMLHNDPHARHSD-- 60

  Fly    62 DAHHSHDMMEMSGPEQDVGGHEHVHENSTIAERLYSEVRVLCWIMTNPSNHQKKARHVKRTWGKR 126
            |:.|:|...:|   :.:....:|..||:.:||.||.:|:||||:||:|.|.:|||:|||.||.:|
  Rat    61 DSGHNHLKGQM---DFNADSSQHKDENTDVAENLYQKVKVLCWVMTSPQNLEKKAKHVKATWAQR 122

  Fly   127 CNKLIFMSSAKDDELDAVALPVGEGRNNLWGKTKEAYKYIYEHHINDADWFLKADDDTYTIVENM 191
            |||::||||.::.:...|.|...|||..|:.||.:|::|:::|::.|||||:|||||||.|::|:
  Rat   123 CNKVLFMSSEENKDFPTVGLETKEGREQLYWKTIKAFQYVHDHYLEDADWFMKADDDTYVILDNL 187

  Fly   192 RYMLYPYSPETPVYFGCKFKPYVKQGYMSGGAGYVLSREAVRRFVVEALPNPKLCKSDNSGAEDV 256
            |::|..|:||.|:|||.:|||||||||||||||||||:||:||| |:|....|...|  |..||:
  Rat   188 RWLLSKYNPEQPIYFGRRFKPYVKQGYMSGGAGYVLSKEALRRF-VDAFKTEKCTHS--SSIEDL 249

  Fly   257 EIGKCLQNVNVLAGDSRDSNGRGRFFPFVPEHHLIPSHTDKKFWYWQYIFYKTDEGLDCCSDNAI 321
            .:|:|::.:.|.||||||..|:..|.|||||||||..:..|.||||.|.:|...||..||||.|:
  Rat   250 ALGRCMEIIKVEAGDSRDPTGKETFHPFVPEHHLIKGYLPKTFWYWNYNYYPPVEGPGCCSDIAV 314

  Fly   322 SFHYVSPNQMYVLDYLIYHLRPYG-IINTPDALPNKL 357
            |||||....||.|:||:||||||| :.....|||..:
  Rat   315 SFHYVDSTTMYELEYLVYHLRPYGYLYRYQPALPENI 351

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
C1GalTANP_609258.1 Galactosyl_T 119..>265 CDD:304462 79/145 (54%)
C1galt1XP_038964253.1 Galactosyl_T 115..>256 CDD:419759 79/143 (55%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 201 1.000 Domainoid score I2916
eggNOG 1 0.900 - - E1_KOG2246
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H10599
Inparanoid 1 1.050 342 1.000 Inparanoid score I2270
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1407357at2759
OrthoFinder 1 1.000 - - FOG0000473
OrthoInspector 1 1.000 - - otm44760
orthoMCL 1 0.900 - - OOG6_103571
Panther 1 1.100 - - O PTHR23033
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X502
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
1413.830

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