DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment C1GalTA and C1galt1c1

DIOPT Version :9

Sequence 1:NP_609258.1 Gene:C1GalTA / 34215 FlyBaseID:FBgn0032078 Length:388 Species:Drosophila melanogaster
Sequence 2:NP_067525.1 Gene:C1galt1c1 / 59048 MGIID:1913493 Length:316 Species:Mus musculus


Alignment Length:357 Identity:103/357 - (28%)
Similarity:165/357 - (46%) Gaps:77/357 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    24 SLIVGLIVG--FCLAELFVYSTPERSEFMPYDGH-RHGDVNDAHHSHDMMEMSGPEQDVGGHEHV 85
            |.:.|:::|  ||.....:             || |.|  |..|| |:...:..|.:|       
Mouse     7 SFLKGVMLGSIFCALITML-------------GHIRIG--NRMHH-HEHHHLQAPNKD------- 48

  Fly    86 HENSTIAE----RLYSEVRVLCWIMTNPSNHQKKARHVKRTWGKRCNKLIFMSSAKDDELDAVAL 146
             :.|.|:|    .|....||.|.::..|.:....|. ||.||.|.|:|..|.||......:::.:
Mouse    49 -DISKISEAERMELSKSFRVYCIVLVKPKDVSLWAA-VKETWTKHCDKAEFFSSENVKVFESINM 111

  Fly   147 PVGEGRNNLWGKTKEAYKYIYEHHINDADWFLKADDDTYTIVENMRYMLYPYSPETPVYFGCKFK 211
            ..    |::|...::||||.|:.:.:..:||..|...|:.::||::|.|.......|.|.|    
Mouse   112 DT----NDMWLMMRKAYKYAYDQYRDQYNWFFLARPTTFAVIENLKYFLLKKDQSQPFYLG---- 168

  Fly   212 PYVKQG---YMSGGAGYVLSREAVRRFVVEALPNPKLCKSDNSG-----AEDVEIGKCLQNVNVL 268
            ..||.|   |:|...|.|||.|:::| :...|..|:.| .:..|     :||.::..||:...|.
Mouse   169 HTVKSGDLEYVSVDGGIVLSIESMKR-LNSLLSVPEKC-PEQGGMIWKISEDKQLAVCLKYAGVF 231

  Fly   269 AGDSRDSNGRGRFFP-----FVPEHHLIPSHTDKKFWYWQYIFYKTDEGLDCCSDNAISFHYVSP 328
            |.::.|::|:..|..     |:.|     :.|::.        .:..||  ||||.|::|:.::|
Mouse   232 AENAEDADGKDVFNTKSVGLFIKE-----AMTNQP--------NQVVEG--CCSDMAVTFNGLTP 281

  Fly   329 NQMYVLDYLIYHLRPYG-IINTPDAL----PN 355
            |||:|:.|.:|.||.:| :.|  |||    ||
Mouse   282 NQMHVMMYGVYRLRAFGHVFN--DALVFLPPN 311

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
C1GalTANP_609258.1 Galactosyl_T 119..>265 CDD:304462 47/153 (31%)
C1galt1c1NP_067525.1 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG2246
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1407357at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR23033
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
43.920

Return to query results.
Submit another query.