DRSC/TRiP Functional Genomics Resources

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Protein Alignment C1GalTA and c1galt1a

DIOPT Version :9

Sequence 1:NP_609258.1 Gene:C1GalTA / 34215 FlyBaseID:FBgn0032078 Length:388 Species:Drosophila melanogaster
Sequence 2:NP_001070842.1 Gene:c1galt1a / 557675 ZFINID:ZDB-GENE-061013-303 Length:408 Species:Danio rerio


Alignment Length:394 Identity:172/394 - (43%)
Similarity:234/394 - (59%) Gaps:37/394 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 ILNEGRSNKRSFVSLIVGLIVGFC----------LAELFVYSTPERSEFMPYDGHRHGDVN---- 61
            |:..|.|  |...||  |.:||.|          ..|.|.:.:..||...|...|.....|    
Zfish     3 IMKAGSS--RCAFSL--GFLVGSCSLYVFLRQVWFEESFSWQSNGRSSPSPPISHEQNSSNLTWR 63

  Fly    62 -DAHHSHDMMEMSGPEQDVGGHEHVHENSTIAERLYSEVRVLCWIMTNPSNHQKKARHVKRTWGK 125
             :.....::...:.|.:|  ||        ||:.|:.:||:|||:||.|||.|.||:|||.||.:
Zfish    64 VEGSALINLKHPNQPGED--GH--------IADELFKKVRILCWVMTGPSNLQSKAQHVKNTWSR 118

  Fly   126 RCNKLIFMSSAKDDELDAVALPVGEGRNNLWGKTKEAYKYIYEHHINDADWFLKADDDTYTIVEN 190
            .||.::||||.:|.....|.|..||||:.|:.||..|:.|..::|.::|||||||||||:.:|:|
Zfish   119 HCNVVLFMSSEEDRSFPTVGLGTGEGRDQLYWKTIRAFHYALKNHGHEADWFLKADDDTFVVVDN 183

  Fly   191 MRYMLYPYSPETPVYFGCKFKPYVKQGYMSGGAGYVLSREAVRRFVVEALPNPKLCKSDNSGAED 255
            :|::|..|:||.|:|||.:||||.||||||||||||||:||:||| ||.. :.|:| :..:..||
Zfish   184 LRWILSNYTPEQPIYFGKRFKPYTKQGYMSGGAGYVLSKEALRRF-VEGF-STKVC-THTTPVED 245

  Fly   256 VEIGKCLQNVNVLAGDSRDSNGRGRFFPFVPEHHLIPSHTDKKFWYWQYIFYKTDEGLDCCSDNA 320
            :.:|:||:.:.|||||||||..|..|.||:|||||....: |.||||.|.:|...||..||||.|
Zfish   246 LAMGQCLEKMGVLAGDSRDSLHRETFHPFIPEHHLTGKFS-KTFWYWNYCYYPIVEGPQCCSDLA 309

  Fly   321 ISFHYVSPNQMYVLDYLIYHLRPYGIINTPDALPNKLAVGELMPEIKEQATES--TSDGVSKRSA 383
            :|||||.|..||.|:|..|||||:|..:...  |...||..|:.:..:..||:  :.:|..::.|
Zfish   310 VSFHYVDPVLMYTLEYYTYHLRPFGYQHRYQ--PPVPAVLSLLSQTVKTTTETQRSEEGAKEKPA 372

  Fly   384 ETKT 387
            .|.:
Zfish   373 LTNS 376

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
C1GalTANP_609258.1 Galactosyl_T 119..>265 CDD:304462 77/145 (53%)
c1galt1aNP_001070842.1 Galactosyl_T <169..292 CDD:304462 74/126 (59%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 356..408 5/21 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170589078
Domainoid 1 1.000 173 1.000 Domainoid score I3636
eggNOG 1 0.900 - - E1_KOG2246
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 314 1.000 Inparanoid score I2547
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000473
OrthoInspector 1 1.000 - - mtm6507
orthoMCL 1 0.900 - - OOG6_103571
Panther 1 1.100 - - LDO PTHR23033
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R2430
SonicParanoid 1 1.000 - - X502
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
ZFIN 00.000 Not matched by this tool.
1312.780

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