DRSC/TRiP Functional Genomics Resources

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Protein Alignment C1GalTA and c1galt1c1

DIOPT Version :9

Sequence 1:NP_609258.1 Gene:C1GalTA / 34215 FlyBaseID:FBgn0032078 Length:388 Species:Drosophila melanogaster
Sequence 2:NP_001004886.1 Gene:c1galt1c1 / 448225 XenbaseID:XB-GENE-941230 Length:317 Species:Xenopus tropicalis


Alignment Length:359 Identity:101/359 - (28%)
Similarity:157/359 - (43%) Gaps:84/359 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 ILNEGRSNKRSFVSLIVGLIV--GFC-----LAELFVYSTPERSEFMPYDGHRHGDVNDAHHSHD 68
            :::||.|..|       |:::  |||     |..:.|             ||..|..::.||   
 Frog     1 MISEGGSFMR-------GMLIGGGFCVVITLLGHIKV-------------GHEQGISHEHHH--- 42

  Fly    69 MMEMSGPEQDVGGHEHVHENSTIAER--LYSEVRVLCWIMTNPSNHQKKARH---VKRTWGKRCN 128
               :..|::     |.|.:.|. :||  |...::|.|.|:..|    |...|   |:.||.|.|:
 Frog    43 ---IQAPDK-----EEVKKLSE-SERLELSHSMQVYCIILVRP----KDLSHWAAVRETWSKHCD 94

  Fly   129 KLIFMSSAKDDELDAVALPVGEGRNNLWGKTKEAYKYIYEHHINDADWFLKADDDTYTIVENMRY 193
            |..:.||......:::::..    |:||...::|.:..||::.|..:||......|:.::||::|
 Frog    95 KADYYSSEPMKVFESISVDT----NDLWAMMRKAIQMTYENNKNAYNWFFICTPSTFAVIENLKY 155

  Fly   194 MLYPYSPETPVYFGCKFKPYVKQG---YMSGGAGYVLSREAVRRFVVEALPNPKLCKSDNSG--- 252
            .|....|..|.|.|    ..||.|   |:....|.|||.|::.| :......|:.| .:..|   
 Frog   156 FLLQKDPSQPYYLG----HTVKSGDLDYVDIAGGIVLSIESLHR-LFSIFKEPEKC-PEQGGLIF 214

  Fly   253 --AEDVEIGKCLQNVNVLAGDSRDSNGRGRFFPFVPEHHLIPSHTDKKFWYWQYIF----YKTDE 311
              :||.::..||:...|||.::.||.|:..|            :|.......|...    .|..|
 Frog   215 KMSEDKQLAMCLKYKGVLAENAEDSEGKNVF------------NTKSVGTLIQETMANNPQKVVE 267

  Fly   312 GLDCCSDNAISFHYVSPNQMYVLDYLIYHLRPYG 345
            |  ||||.||:|..:|||.|:|:.|.:|.||.||
 Frog   268 G--CCSDMAITFSGISPNFMHVMMYGVYRLRAYG 299

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
C1GalTANP_609258.1 Galactosyl_T 119..>265 CDD:304462 43/153 (28%)
c1galt1c1NP_001004886.1 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1407357at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.010

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