DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment C1GalTA and LFNG

DIOPT Version :10

Sequence 1:NP_609258.1 Gene:C1GalTA / 34215 FlyBaseID:FBgn0032078 Length:388 Species:Drosophila melanogaster
Sequence 2:NP_001035257.1 Gene:LFNG / 3955 HGNCID:6560 Length:379 Species:Homo sapiens


Alignment Length:258 Identity:58/258 - (22%)
Similarity:89/258 - (34%) Gaps:86/258 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly    60 VNDAHHSHDMMEM-------SGP-----EQDVGGHEHVHENSTIAERLYSEVRVLCWIMTNPSNH 112
            |.|.|...:...:       :||     .:...||..     .:||.| :...|...:.|....|
Human    68 VRDVHSLSEYFSLLTRARRDAGPPPGAAPRPADGHPR-----PLAEPL-APRDVFIAVKTTKKFH 126

  Fly   113 QKKARHVKRTWGKRCNKLIFMSSAKDDELDAVALPVG----------EGRNNLWGKTKEAYKYIY 167
            :.:...:..||..|..::.|:.:..:||  |:|...|          ..|..|..|....|....
Human   127 RARLDLLLETWISRHKEMTFIFTDGEDE--ALARHTGNVVITNCSAAHSRQALSCKMAVEYDRFI 189

  Fly   168 EHHINDADWFLKADDDTYTIVENMRYML-----YPYSPETPVYFG----------------CKFK 211
            |   :...||...|||.|.   |:|.:|     ||::.:  ||.|                .|.:
Human   190 E---SGRKWFCHVDDDNYV---NLRALLRLLASYPHTRD--VYVGKPSLDRPIQAMERVSENKVR 246

  Fly   212 PYVKQGYMSGGAGYVLSR-------------------EAVR-------RFVVEALPNPKLCKS 248
            | |...:.:||||:.:||                   |.:|       .::||||....|.:|
Human   247 P-VHFWFATGGAGFCISRGLALKMSPWASGGHFMNTAERIRLPDDCTIGYIVEALLGVPLIRS 308

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
C1GalTANP_609258.1 Galactosyl_T 119..>265 CDD:473923 45/187 (24%)
LFNGNP_001035257.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 86..107 4/25 (16%)
Fringe 110..358 CDD:367085 49/211 (23%)

Return to query results.
Submit another query.