DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment C1GalTA and CG8708

DIOPT Version :10

Sequence 1:NP_609258.1 Gene:C1GalTA / 34215 FlyBaseID:FBgn0032078 Length:388 Species:Drosophila melanogaster
Sequence 2:NP_610360.2 Gene:CG8708 / 35792 FlyBaseID:FBgn0033271 Length:450 Species:Drosophila melanogaster


Alignment Length:365 Identity:230/365 - (63%)
Similarity:280/365 - (76%) Gaps:7/365 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MTANSLLGRSILNEG-RSNKRSFVSLIVGLIVGFCLAELFVYSTPERSEFMPYDGHRHGDVNDAH 64
            ||:.|||.||:|.|. ||..||..:||.||:||:|||::|....|..|.: ||...|..|...|.
  Fly     1 MTSASLLSRSLLTEAPRSKNRSVFTLIAGLVVGYCLAQIFSSIAPHESLY-PYLSRRFSDSQVAT 64

  Fly    65 HSHDMMEMSGPEQDVGGHEHVHENSTIAERLYSEVRVLCWIMTNPSNHQKKARHVKRTWGKRCNK 129
            ..     ...|||....|:|.::|.::||:|..|||:|||:||||:||:|||||||||||||||.
  Fly    65 GG-----QLAPEQSGLKHDHRNDNVSVAEQLKKEVRILCWVMTNPTNHKKKARHVKRTWGKRCNI 124

  Fly   130 LIFMSSAKDDELDAVALPVGEGRNNLWGKTKEAYKYIYEHHINDADWFLKADDDTYTIVENMRYM 194
            |:||||..|:||..|.|.|||||.|||.|.|||:||:|.||.||||:|.|||||||.::||||||
  Fly   125 LLFMSSGADEELPTVKLDVGEGRENLWAKVKEAFKYVYHHHYNDADFFYKADDDTYAVIENMRYM 189

  Fly   195 LYPYSPETPVYFGCKFKPYVKQGYMSGGAGYVLSREAVRRFVVEALPNPKLCKSDNSGAEDVEIG 259
            ||||:|||||:||.||||:||||||||||||:|||||:||||||.:||||:|.......||:|||
  Fly   190 LYPYNPETPVHFGFKFKPFVKQGYMSGGAGYILSREALRRFVVEGIPNPKMCLPGTVVNEDIEIG 254

  Fly   260 KCLQNVNVLAGDSRDSNGRGRFFPFVPEHHLIPSHTDKKFWYWQYIFYKTDEGLDCCSDNAISFH 324
            :|::|:||.||||||..||||.|||:|||||||:..||.||||.|::||||:|||||||.|||||
  Fly   255 RCMENLNVTAGDSRDEIGRGRMFPFIPEHHLIPAKADKNFWYWNYLYYKTDDGLDCCSDLAISFH 319

  Fly   325 YVSPNQMYVLDYLIYHLRPYGIINTPDALPNKLAVGELMP 364
            ||:||..||||||||||:|||::.:.:.||.||.||:.:|
  Fly   320 YVAPNSFYVLDYLIYHLKPYGLLRSLEPLPAKLKVGQFLP 359

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
C1GalTANP_609258.1 Galactosyl_T 119..>265 CDD:473923 104/145 (72%)
CG8708NP_610360.2 None

Return to query results.
Submit another query.