DRSC/TRiP Functional Genomics Resources

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Protein Alignment C1GalTA and c1galt1b

DIOPT Version :9

Sequence 1:NP_609258.1 Gene:C1GalTA / 34215 FlyBaseID:FBgn0032078 Length:388 Species:Drosophila melanogaster
Sequence 2:NP_956345.1 Gene:c1galt1b / 337131 ZFINID:ZDB-GENE-030131-9075 Length:374 Species:Danio rerio


Alignment Length:375 Identity:163/375 - (43%)
Similarity:219/375 - (58%) Gaps:33/375 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly    27 VGLIVGFCLAELFVYSTPERSEFMPYDGHRHGDVNDAHHSHDMMEMSGPEQ-----------DVG 80
            ||.:||.|    .:|....::.|....|.|    ....|...::||...|.           ::.
Zfish    12 VGFLVGTC----SLYLLLRQAGFTRDSGSR----EPGTHDKTLLEMLEEENKNWKKERSALFNLN 68

  Fly    81 GHEHVHENSTIAERLYSEVRVLCWIMTNPSNHQKKARHVKRTWGKRCNKLIFMSSAKDDELDAVA 145
            ...|..|:..:|:.||..||:|||:||.|.|.:|||||||.||.:.||.::|:||..:.:...|.
Zfish    69 HPHHTGEDGALADSLYKRVRILCWVMTGPDNLEKKARHVKATWSRHCNIVVFISSVDNPDFPTVG 133

  Fly   146 LPVGEGRNNLWGKTKEAYKYIYEHHINDADWFLKADDDTYTIVENMRYMLYPYSPETPVYFGCKF 210
            |...|||:.|:.||..|:.|:.|.|.::||||||||||||.||:|:|::|..:|||.|||||.:|
Zfish   134 LNTKEGRDQLYWKTIRAFHYVMEKHSDEADWFLKADDDTYVIVDNLRWILARHSPEDPVYFGRRF 198

  Fly   211 KPYVKQGYMSGGAGYVLSREAVRRFVVEALPNPKLCKSDNSGAEDVEIGKCLQNVNVLAGDSRDS 275
            ||||||||||||||||||:||:||| ||.. ..|:| :..:..||:.:|:|::.:.|.||||||:
Zfish   199 KPYVKQGYMSGGAGYVLSKEALRRF-VEGF-RTKVC-THTTSVEDLAMGQCMEKIGVKAGDSRDT 260

  Fly   276 NGRGRFFPFVPEHHLIPSHTDKKFWYWQYIFYKTDEGLDCCSDNAISFHYVSPNQMYVLDYLIYH 340
            ..|..|.|||||.||..:. .|.||||.|.:|...:|..||||.|:|||||..:.||:|:|..||
Zfish   261 MQRETFHPFVPESHLTGTF-PKTFWYWNYCYYPIVQGPQCCSDLAVSFHYVDASHMYLLEYYTYH 324

  Fly   341 LRPYGI---INTPDALPNKLAVGELMPEIKEQATESTSDGVSKRSAETKT 387
            ||.:|.   ...|:  ||..|     ||..|.......|.|..:..|.::
Zfish   325 LRAFGYKYRYQPPE--PNVKA-----PEKVETRVLEQKDKVEAQEEENQS 367

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
C1GalTANP_609258.1 Galactosyl_T 119..>265 CDD:304462 78/145 (54%)
c1galt1bNP_956345.1 Galactosyl_T 107..274 CDD:304462 92/169 (54%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 355..374 3/13 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 173 1.000 Domainoid score I3636
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 314 1.000 Inparanoid score I2547
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1407357at2759
OrthoFinder 1 1.000 - - FOG0000473
OrthoInspector 1 1.000 - - mtm6507
orthoMCL 1 0.900 - - OOG6_103571
Panther 1 1.100 - - O PTHR23033
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R2430
SonicParanoid 1 1.000 - - X502
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
ZFIN 00.000 Not matched by this tool.
1211.960

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