DRSC/TRiP Functional Genomics Resources

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Protein Alignment C1GalTA and C1galt1c1

DIOPT Version :10

Sequence 1:NP_609258.1 Gene:C1GalTA / 34215 FlyBaseID:FBgn0032078 Length:388 Species:Drosophila melanogaster
Sequence 2:NP_001025204.1 Gene:C1galt1c1 / 302499 RGDID:1311230 Length:316 Species:Rattus norvegicus


Alignment Length:353 Identity:101/353 - (28%)
Similarity:165/353 - (46%) Gaps:69/353 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    24 SLIVGLIVG--FCLAELFVYSTPERSEFMPYDGH-RHGDVNDAHHSHDMMEMSGPEQDVGGHEHV 85
            |.:.|:::|  ||.....:             || |.|  |..|| |:...:..|.:|    :.:
  Rat     7 SFLKGVMLGSIFCALITML-------------GHIRIG--NRMHH-HEHHHLQAPNKD----DIL 51

  Fly    86 HENSTIAERLYSEVRVLCWIMTNPSNHQKKARHVKRTWGKRCNKLIFMSSAKDDELDAVALPVGE 150
            ..:.|....|....:|.|.::..|.:....|. ||.||.|.|:|..|.||......:::.:..  
  Rat    52 KISETERMELSKSFQVYCIVLVKPKDVSLWAA-VKETWTKHCDKAEFFSSENVKVFESINMDT-- 113

  Fly   151 GRNNLWGKTKEAYKYIYEHHINDADWFLKADDDTYTIVENMRYMLYPYSPETPVYFGCKFKPYVK 215
              |::|...::||||.|:.:.:..:||..|...|:.::||::|.|....|..|.|.|    ..||
  Rat   114 --NDMWLMMRKAYKYAYDKYKDQYNWFFLARPTTFAVIENLKYFLLRKDPSQPFYLG----HTVK 172

  Fly   216 QG---YMSGGAGYVLSREAVRRFVVEALPNPKLCKSDNSG-----AEDVEIGKCLQNVNVLAGDS 272
            .|   |:|...|.|||.|:::| :...|..|:.| .:..|     :||.::..||:...|.|.::
  Rat   173 SGDLEYVSVDGGIVLSIESMKR-LNGLLSVPEKC-PEQGGMIWKISEDKQLAVCLKYAGVFAENA 235

  Fly   273 RDSNGRGRFFP-----FVPEHHLIPSHTDKKFWYWQYIFYKTDEGLDCCSDNAISFHYVSPNQMY 332
            .|::|:..|..     |:.|     :.|::.        .:..||  ||||.|::|:.::||||:
  Rat   236 EDADGKDVFNTKSVGLFIKE-----AMTNQP--------NQVVEG--CCSDMAVTFNGLTPNQMH 285

  Fly   333 VLDYLIYHLRPYG-IINTPDAL----PN 355
            |:.|.:|.||.:| :.|  |||    ||
  Rat   286 VMMYGVYRLRAFGHVFN--DALVFLPPN 311

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
C1GalTANP_609258.1 Galactosyl_T 119..>265 CDD:473923 48/153 (31%)
C1galt1c1NP_001025204.1 None

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