DRSC/TRiP Functional Genomics Resources

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Protein Alignment C1GalTA and F56H6.1

DIOPT Version :9

Sequence 1:NP_609258.1 Gene:C1GalTA / 34215 FlyBaseID:FBgn0032078 Length:388 Species:Drosophila melanogaster
Sequence 2:NP_493101.1 Gene:F56H6.1 / 186412 WormBaseID:WBGene00010162 Length:327 Species:Caenorhabditis elegans


Alignment Length:261 Identity:78/261 - (29%)
Similarity:122/261 - (46%) Gaps:21/261 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly    85 VHENSTIAERLYSEVRVLCWIMTNPSNHQKKARHVKRTWGKRCNKLIFMSSA----KDDELDAVA 145
            ||..|.:  .|.|..::.|::.|:..::..:...:..||..:|:...|.:..    .:.....|.
 Worm    66 VHSASAL--ELPSTGQLFCFVETSAVHYDDRVPSIASTWLPKCDNGRFFTKTPLPNSNMTYSTVY 128

  Fly   146 LPVGEGRNNLWGKTKEAYKYIYEHHINDADWFLKADDDTYTIVENMRYMLYPYSPETPVYFGCKF 210
            |.:.:...:|:.||...:.|.|.|.....||:||||||||..:::::..|....|..|:|.|...
 Worm   129 LNLKDSYYDLFRKTTFGFYYSYMHISKSFDWYLKADDDTYFAMDHLKEYLSTLDPTKPLYLGYVL 193

  Fly   211 KPYVKQGYMSGGAGYVLSREAVRRFVVEALPNPKLCKSDNSGAEDVEIGKCLQNVNVLAGDSRDS 275
            |||.|.||.|||:||:||..||:.||.:...:...|..|  .|||..:|:|:....:...|:||.
 Worm   194 KPYFKNGYNSGGSGYILSNAAVKLFVEKLYHDEYTCPYD--WAEDRGMGRCMARAGIFPTDTRDD 256

  Fly   276 NGRGRFFPFVPEH--HLIPSHTDKKFWYWQYIFYKTDEGLDCCSDNAISFHYVSPNQMYVLDYLI 338
            .|..||.||.|..  .:.|.        |.|  |..:.| ...|...:|.|.:..:.|..||.::
 Worm   257 KGLNRFMPFKPSELAGVGPE--------WHY--YPMEAG-QYASQKFVSLHRLPQDMMISLDDIL 310

  Fly   339 Y 339
            :
 Worm   311 H 311

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
C1GalTANP_609258.1 Galactosyl_T 119..>265 CDD:304462 51/149 (34%)
F56H6.1NP_493101.1 Galactosyl_T <127..254 CDD:304462 48/128 (38%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160163259
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG2246
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D555141at33208
OrthoFinder 1 1.000 - - FOG0000473
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR23033
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
87.810

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