DRSC/TRiP Functional Genomics Resources

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Protein Alignment C1GalTA and vav1

DIOPT Version :10

Sequence 1:NP_609258.1 Gene:C1GalTA / 34215 FlyBaseID:FBgn0032078 Length:388 Species:Drosophila melanogaster
Sequence 2:XP_002940062.1 Gene:vav1 / 100497964 XenbaseID:XB-GENE-6074281 Length:844 Species:Xenopus tropicalis


Alignment Length:98 Identity:17/98 - (17%)
Similarity:35/98 - (35%) Gaps:29/98 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly   249 DNSGAEDVEIGKCLQNVNVLAGDSRDSNGRGRFFPFVPEHHLIPSHTDKKFWYWQYIFYKTDEGL 313
            |::|.||.::..|:        |..:..|...:...:.......:.||.|.        .:|:..
 Frog   149 DDTGEEDEDLYDCV--------DMEEEEGNEIYEDLMKLEEQPAAPTDGKM--------TSDDMR 197

  Fly   314 DCCSD-------------NAISFHYVSPNQMYV 333
            .||..             .:|:.:::.|.||::
 Frog   198 RCCLQELYQTEEKYTDTLESITQYFMKPLQMFL 230

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
C1GalTANP_609258.1 Galactosyl_T 119..>265 CDD:473923 5/15 (33%)
vav1XP_002940062.1 CH_VAV1 2..121 CDD:409111
RhoGEF 200..373 CDD:459876 5/31 (16%)
PH_Vav 387..510 CDD:269930
C1_VAV1 512..568 CDD:410417
SH3_VAV1_1 596..658 CDD:212912
SH2 665..767 CDD:472789
SH3_VAV1_2 785..838 CDD:212909
Blue background indicates that the domain is not in the aligned region.

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