DRSC/TRiP Functional Genomics Resources

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Protein Alignment C1GalTA and c1galt1

DIOPT Version :9

Sequence 1:NP_609258.1 Gene:C1GalTA / 34215 FlyBaseID:FBgn0032078 Length:388 Species:Drosophila melanogaster
Sequence 2:XP_002938761.1 Gene:c1galt1 / 100487794 XenbaseID:XB-GENE-992000 Length:362 Species:Xenopus tropicalis


Alignment Length:368 Identity:163/368 - (44%)
Similarity:232/368 - (63%) Gaps:29/368 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly    21 SFVSLIVGLIVGFCLAEL---FVYSTPERSEFMPYDGHRHGDVNDAHHSHDMMEMSGP------E 76
            |..:...|:.:||..:.:   .|:...:..:..|...|     ||.|..|.....:||      :
 Frog     9 SLATFSFGIAIGFIFSYVIFSIVFEGQDSPQGKPEVLH-----NDPHGRHSDDAPAGPPLQGQMD 68

  Fly    77 QDVGGHEHVHENSTIAERLYSEVRVLCWIMTNPSNHQKKARHVKRTWGKRCNKLIFMSSAKDDEL 141
            .:....:|..|::.:|:.|||:|::|||:||.|.|..||.:|||.||.:||||:::|||.::.|.
 Frog    69 FNADAQQHHDEDTHVADDLYSKVKILCWVMTGPQNLDKKTKHVKATWAQRCNKVLYMSSEENKEF 133

  Fly   142 DAVALPVGEGRNNLWGKTKEAYKYIYEHHINDADWFLKADDDTYTIVENMRYMLYPYSPETPVYF 206
            ..|.|...|||:.|:.||.:|::|:::||:.:||||:|||||||.:::|:|::|..:.|..||||
 Frog   134 PTVGLDTKEGRDQLYWKTIKAFQYVHDHHLEEADWFMKADDDTYVVLDNLRWLLSKHDPNDPVYF 198

  Fly   207 GCKFKPYVKQGYMSGGAGYVLSREAVRRFVVEALPNPKLCKSDNSGAEDVEIGKCLQNVNVLAGD 271
            |.:|||||||||||||||||||:||::|| |.|....|...|  |..||:.:|||::|:||.|||
 Frog   199 GRRFKPYVKQGYMSGGAGYVLSKEALKRF-VNAFKEEKCTHS--SSVEDLALGKCMENINVKAGD 260

  Fly   272 SRDSNGRGRFFPFVPEHHLIPSHTDKKFWYWQYIFYKTDEGLDCCSDNAISFHYVSPNQMYVLDY 336
            |||::|:..|.|||||||||..:..|.||||.|.:|...||..||||.|:|||||....||.|:|
 Frog   261 SRDTSGKETFHPFVPEHHLIHGYLPKTFWYWNYNYYPAVEGPGCCSDLAVSFHYVDSTTMYQLEY 325

  Fly   337 LIYHLRPYGIIN--TPDALPNKLAVGELMPEIKEQATESTSDG 377
            |::||||||..:  :||:....:          :..|:.|.||
 Frog   326 LVHHLRPYGYKHRYSPDSTAKTM----------KDDTDKTKDG 358

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
C1GalTANP_609258.1 Galactosyl_T 119..>265 CDD:304462 77/145 (53%)
c1galt1XP_002938761.1 Galactosyl_T <168..>254 CDD:389837 51/88 (58%)
EEP 280..>361 CDD:382041 37/89 (42%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 190 1.000 Domainoid score I3200
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H10599
Inparanoid 1 1.050 332 1.000 Inparanoid score I2383
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1407357at2759
OrthoFinder 1 1.000 - - FOG0000473
OrthoInspector 1 1.000 - - mtm9410
Panther 1 1.100 - - O PTHR23033
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R2430
SonicParanoid 1 1.000 - - X502
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
1111.100

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