DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tsp29Fb and tspan5

DIOPT Version :10

Sequence 1:NP_523516.1 Gene:Tsp29Fb / 34212 FlyBaseID:FBgn0032075 Length:308 Species:Drosophila melanogaster
Sequence 2:NP_001072198.1 Gene:tspan5 / 779644 XenbaseID:XB-GENE-868310 Length:268 Species:Xenopus tropicalis


Alignment Length:248 Identity:58/248 - (23%)
Similarity:107/248 - (43%) Gaps:29/248 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly    14 CAKYMLIIVSFMFALTAILLIMVGT---TIQTIFGDFSLFID-GHFSSPPALLIAIGFILIAVAA 74
            |.||.:...:.:|.|..|..:.||.   :.:.:..:.|...| |.| .|..|.:.:|.::..:..
 Frog    14 CIKYFIFGFNVIFWLLGITFLGVGLWAWSEKGVLSNISSITDLGGF-DPVWLFLVVGGVMFILGF 77

  Fly    75 LGAYGAVKESVMVINLYGVCLFLVFILEVSAAIAAFVMQSQVRGMLIRTMNQALAEYEHDPYVES 139
            .|..||::|:..::..:.|.|.::|.||::|.:.|||.:..::..|...:|..:..|..|..:::
 Frog    78 AGCIGALRENTFLLKFFSVFLGIIFFLELTAGVLAFVFKDWIKDQLQFFINNNIRAYRDDIDLQN 142

  Fly   140 GVDFMQSMLECCGVNEPEDWKDYLSANVNFTLGVDDV-------VVPNSCCGNQPT--------- 188
            .:||.|...:|||....:||      |:|......|.       .||.|||...|.         
 Frog   143 LIDFTQEYWQCCGAFGADDW------NLNIYFNCTDANASRERCGVPFSCCTKDPAEDVINTQCG 201

  Fly   189 -SLNDSTQMTCMET-YDYGCFRKMNFIVSQSAMLIATGATTVAFVQLLGVLCA 239
             .:....::...|| :..||..:....:..:..::|.....:|.:|:.|:..|
 Frog   202 YDVRQKPELDQQETIHTKGCVPQFEKWLQDNLTIVAGVFIGIALLQIFGICLA 254

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp29FbNP_523516.1 Tetraspanin 16..244 CDD:459767 57/246 (23%)
tetraspanin_LEL 109..210 CDD:351888 28/118 (24%)
tspan5NP_001072198.1 Tetraspanin 15..258 CDD:459767 57/247 (23%)
TM4SF9_like_LEL 113..233 CDD:239412 27/125 (22%)

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